| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is yqgH [H]
Identifier: 148642627
GI number: 148642627
Start: 543072
End: 543947
Strand: Reverse
Name: yqgH [H]
Synonym: Msm_0567
Alternate gene names: 148642627
Gene position: 543947-543072 (Counterclockwise)
Preceding gene: 148642628
Following gene: 148642626
Centisome position: 29.35
GC content: 33.68
Gene sequence:
>876_bases ATGGAAACTAAAAACATTAATGAATTTTTTATTGAGAAAGGATTGTTTATAACAGCAATCTTTTCCATTCTTGTTATTTT TACAATATTGGCATTTATTGTTAGTGAAGCAATTCCTGCATTTCAGTCATATGGATTTTTCCATTTTTTAACAGGAAGTA CCTGGGCTCCTAACGAAGGTCAATTTGGTGTTTTCCCAATGATTATAGGTTCAATATTTGTAACTTTACTTTCATTGGTG ATAGCAGTCCCATTATCTTTATTATGTGCCATATTCATGGAAGAAATAGCTCCTGATAAAATAAAATTACTTTTAAAACC GGTTATCCAAACATTATCTGGAATTCCTTCAGTAGTTTACGGATTTTTTGGTTTAACAGTATTGGTACCTGTTGTACGTC AACATTTTGGAGGTACTGGATTTAGTGTATTTACAGCTGCTTTAATTTTATCAGTTATGATATTGCCTACTATTATATCA GTTTCTCAAGATGCAATTAAAGCAGTTCCAGGTGAATATAGGGAAGCAGCATTAGGTCTAGGATCTACTCATTGGCAAAC AATTCGCCATATTATTTTCCCGTCTGCACTGCCGGGAATTATTACTGCAGTTATTCTTGGTATAGGCAGGGCAATTGGTG AAACTTTAGCTGTAATTATGGTTGCAGGTAATGTTGCTCAAATTCCAGGGTCAATATTTGCTCCGGTCAGGACACTTACA ACAAACATTGCTTTAGAAATGGGTTATGCTACAAATTTACATTATAATGCATTATTTGGTACTGCTGTTGTATTATTCAT TATAATTGCTGCTTTATTGTTAGTGGCAAATCATGTTCAAAATAAATATGGTATTGGTGCGGAGGGGATTGAATGA
Upstream 100 bases:
>100_bases AACTAAAAACTTCATTGATTGGGTTTTAAGTGATGACGGTGGTAAAGTATTGGCTGATGAAAAAATTATTAAAACTTCAA AATAGATTCATAGTGGTTTG
Downstream 100 bases:
>100_bases AGAGTTTTTGCTCTCCTAAGACTTCCCAGAAAATAATGAATGGTGTATTCATATTGTCTGGTGTTATTACATTACTTATA TTGGTTACTATATTAGGTTA
Product: phosphate ABC transporter, permease component, PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues METKNINEFFIEKGLFITAIFSILVIFTILAFIVSEAIPAFQSYGFFHFLTGSTWAPNEGQFGVFPMIIGSIFVTLLSLV IAVPLSLLCAIFMEEIAPDKIKLLLKPVIQTLSGIPSVVYGFFGLTVLVPVVRQHFGGTGFSVFTAALILSVMILPTIIS VSQDAIKAVPGEYREAALGLGSTHWQTIRHIIFPSALPGIITAVILGIGRAIGETLAVIMVAGNVAQIPGSIFAPVRTLT TNIALEMGYATNLHYNALFGTAVVLFIIIAALLLVANHVQNKYGIGAEGIE
Sequences:
>Translated_291_residues METKNINEFFIEKGLFITAIFSILVIFTILAFIVSEAIPAFQSYGFFHFLTGSTWAPNEGQFGVFPMIIGSIFVTLLSLV IAVPLSLLCAIFMEEIAPDKIKLLLKPVIQTLSGIPSVVYGFFGLTVLVPVVRQHFGGTGFSVFTAALILSVMILPTIIS VSQDAIKAVPGEYREAALGLGSTHWQTIRHIIFPSALPGIITAVILGIGRAIGETLAVIMVAGNVAQIPGSIFAPVRTLT TNIALEMGYATNLHYNALFGTAVVLFIIIAALLLVANHVQNKYGIGAEGIE >Mature_291_residues METKNINEFFIEKGLFITAIFSILVIFTILAFIVSEAIPAFQSYGFFHFLTGSTWAPNEGQFGVFPMIIGSIFVTLLSLV IAVPLSLLCAIFMEEIAPDKIKLLLKPVIQTLSGIPSVVYGFFGLTVLVPVVRQHFGGTGFSVFTAALILSVMILPTIIS VSQDAIKAVPGEYREAALGLGSTHWQTIRHIIFPSALPGIITAVILGIGRAIGETLAVIMVAGNVAQIPGSIFAPVRTLT TNIALEMGYATNLHYNALFGTAVVLFIIIAALLLVANHVQNKYGIGAEGIE
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=274, Percent_Identity=32.1167883211679, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1790163, Length=235, Percent_Identity=26.3829787234043, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31152; Mature: 31152
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKNINEFFIEKGLFITAIFSILVIFTILAFIVSEAIPAFQSYGFFHFLTGSTWAPNEG CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC QFGVFPMIIGSIFVTLLSLVIAVPLSLLCAIFMEEIAPDKIKLLLKPVIQTLSGIPSVVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHH GFFGLTVLVPVVRQHFGGTGFSVFTAALILSVMILPTIISVSQDAIKAVPGEYREAALGL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC GSTHWQTIRHIIFPSALPGIITAVILGIGRAIGETLAVIMVAGNVAQIPGSIFAPVRTLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH TNIALEMGYATNLHYNALFGTAVVLFIIIAALLLVANHVQNKYGIGAEGIE HHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure METKNINEFFIEKGLFITAIFSILVIFTILAFIVSEAIPAFQSYGFFHFLTGSTWAPNEG CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC QFGVFPMIIGSIFVTLLSLVIAVPLSLLCAIFMEEIAPDKIKLLLKPVIQTLSGIPSVVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHH GFFGLTVLVPVVRQHFGGTGFSVFTAALILSVMILPTIISVSQDAIKAVPGEYREAALGL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC GSTHWQTIRHIIFPSALPGIITAVILGIGRAIGETLAVIMVAGNVAQIPGSIFAPVRTLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH TNIALEMGYATNLHYNALFGTAVVLFIIIAALLLVANHVQNKYGIGAEGIE HHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]