| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is yqgI [H]
Identifier: 148642626
GI number: 148642626
Start: 542227
End: 543075
Strand: Reverse
Name: yqgI [H]
Synonym: Msm_0566
Alternate gene names: 148642626
Gene position: 543075-542227 (Counterclockwise)
Preceding gene: 148642627
Following gene: 148642625
Centisome position: 29.31
GC content: 33.92
Gene sequence:
>849_bases ATGAAGAGTTTTTGCTCTCCTAAGACTTCCCAGAAAATAATGAATGGTGTATTCATATTGTCTGGTGTTATTACATTACT TATATTGGTTACTATATTAGGTTATATTCTTGTTAAAGGACTTCCGGTTATTAATTTTGAGTTTTTATTCTCAAGTCCTA TTGATGCCGGAAGGGAAGGTGGAATATTCCCTATGATTATTTCAAGTATATATGTAGTTTTCATTGCTGCAATAATAGCT ACTCCATTGGGGGTTGGTGCAGCTATTTACATGTCTGAATATGCATCAAATCAAAAAGTTATCAAATTCATCAGATTCGG ATCAGAAACATTGGCTTCAATTCCATCTATTGTATTTGGTTTGTTTGGTTTGGCATTTTTTGTTGTATTCTTGAAATTAG GATGGTGTATATTGTCCGGAGGATTAGTTTTAGCATTAATGGCTATTCCAACAATTTTCCAAGTTGCTGAAGTTACTTTA TCTTCTATTCCAAATTCCTACAAAGAAGGAGGTTACGGATTAGGTGCTACAAAATGGCAGGTTATTTACTCAGTTATTTT GCCTGCAGCATTACCTGGAATAATTACTGGTGTTATTTTAGCTATGACAAGAGCTATTTCTGAAGCAGCAGCTGTTATGT ATGCTGTAGGATCTGCTATAACAGTTCCAGTATCAATATTTGATCCGGGTAGACCTTTGCCGCTTCATTTATATGTATTA GCTACTGAAGGTGTTTCACTTCAAAATGCATATGGAACAGCAGCAGTATTGGTAATTATTGTATTAGTATTAACTATAGC AACTAATTTGGTTGTTGACAGGTATCAAAAGAAAATTATGGGGAAATAA
Upstream 100 bases:
>100_bases TATTTGGTACTGCTGTTGTATTATTCATTATAATTGCTGCTTTATTGTTAGTGGCAAATCATGTTCAAAATAAATATGGT ATTGGTGCGGAGGGGATTGA
Downstream 100 bases:
>100_bases ATAATGAAACTTGAAGTTAGAAATTTAAATACATTTTTTGAGGATACTCAGATTTTAAAAAATGTAAATATGGATGTTCC GGAGAATTCTGTTACTGCAC
Product: phosphate ABC transporter, permease component, PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKSFCSPKTSQKIMNGVFILSGVITLLILVTILGYILVKGLPVINFEFLFSSPIDAGREGGIFPMIISSIYVVFIAAIIA TPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFGLFGLAFFVVFLKLGWCILSGGLVLALMAIPTIFQVAEVTL SSIPNSYKEGGYGLGATKWQVIYSVILPAALPGIITGVILAMTRAISEAAAVMYAVGSAITVPVSIFDPGRPLPLHLYVL ATEGVSLQNAYGTAAVLVIIVLVLTIATNLVVDRYQKKIMGK
Sequences:
>Translated_282_residues MKSFCSPKTSQKIMNGVFILSGVITLLILVTILGYILVKGLPVINFEFLFSSPIDAGREGGIFPMIISSIYVVFIAAIIA TPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFGLFGLAFFVVFLKLGWCILSGGLVLALMAIPTIFQVAEVTL SSIPNSYKEGGYGLGATKWQVIYSVILPAALPGIITGVILAMTRAISEAAAVMYAVGSAITVPVSIFDPGRPLPLHLYVL ATEGVSLQNAYGTAAVLVIIVLVLTIATNLVVDRYQKKIMGK >Mature_282_residues MKSFCSPKTSQKIMNGVFILSGVITLLILVTILGYILVKGLPVINFEFLFSSPIDAGREGGIFPMIISSIYVVFIAAIIA TPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFGLFGLAFFVVFLKLGWCILSGGLVLALMAIPTIFQVAEVTL SSIPNSYKEGGYGLGATKWQVIYSVILPAALPGIITGVILAMTRAISEAAAVMYAVGSAITVPVSIFDPGRPLPLHLYVL ATEGVSLQNAYGTAAVLVIIVLVLTIATNLVVDRYQKKIMGK
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=242, Percent_Identity=30.1652892561983, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1790164, Length=311, Percent_Identity=27.6527331189711, Blast_Score=97, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29947; Mature: 29947
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFCSPKTSQKIMNGVFILSGVITLLILVTILGYILVKGLPVINFEFLFSSPIDAGREG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCC GIFPMIISSIYVVFIAAIIATPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFG CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHH LFGLAFFVVFLKLGWCILSGGLVLALMAIPTIFQVAEVTLSSIPNSYKEGGYGLGATKWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHH VIYSVILPAALPGIITGVILAMTRAISEAAAVMYAVGSAITVPVSIFDPGRPLPLHLYVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCEEEEEE ATEGVSLQNAYGTAAVLVIIVLVLTIATNLVVDRYQKKIMGK EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSFCSPKTSQKIMNGVFILSGVITLLILVTILGYILVKGLPVINFEFLFSSPIDAGREG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCC GIFPMIISSIYVVFIAAIIATPLGVGAAIYMSEYASNQKVIKFIRFGSETLASIPSIVFG CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHH LFGLAFFVVFLKLGWCILSGGLVLALMAIPTIFQVAEVTLSSIPNSYKEGGYGLGATKWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHH VIYSVILPAALPGIITGVILAMTRAISEAAAVMYAVGSAITVPVSIFDPGRPLPLHLYVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCEEEEEE ATEGVSLQNAYGTAAVLVIIVLVLTIATNLVVDRYQKKIMGK EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]