| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642616
Identifier: 148642616
GI number: 148642616
Start: 534388
End: 535992
Strand: Reverse
Name: 148642616
Synonym: Msm_0556
Alternate gene names: NA
Gene position: 535992-534388 (Counterclockwise)
Preceding gene: 148642624
Following gene: 148642615
Centisome position: 28.92
GC content: 32.34
Gene sequence:
>1605_bases ATGAAAGTTTTAATTATTACTGGAAATTTGGCATATCCTTTAATTAAAAATGTTGTAGCTAATGCTAATGTTGAGGTTAT CATTCATATAGCTGATAATACGCAGGTGGCTGCATTTTTAACTCCTAGAATTATTATTGATGAAATAAAAACTCATTTTG CTAATCAATTAGGGGAAATTGACATGATTTTAGTTCCTGGTTTAATAAAAAAAGGAACCAGAGAAATAACAAAAGAATTG GGAATTCCTACTTTTAAAGGTTCAACTGATGGGGCTGATTTGGCCATGGTCTTAAATTTAATTGATCAGATTGAATTGTC TGAGGACAAACCTGCAGATAAACTGATTGAAGAAGAGAAAAGAAAAGAAGCTTTAAAATTCATTAATGATTTTGAAAATG ATGAAGAAACAATCAAAAACTTATTAAAAAAACCTAATAACATCATGATTGGGAATCTTCCGGTAGGTGAAGATTTTCCA ATGCGGGTGCTGTCTGAAATAGCTAATGCTCCATTTTTGTCAAAAGAAGCTTTAATTCATAAATGCCAATATTTTGTGGA TTCTGGAGCTGATATGATTGATATAGGTATGGCTGCAGGTGAAGATTTTTCAGATAAGGTTCCTGAATTAATTGATACCT TAAGGCCAATTGTTGGAGATAGGCCGTTAAGTATTGACACATTAAATGCAAAGGAAATAGAAGTAGCCGCAAAACATGGT ATTGATTTAGTATTAAGTTTGGATTTGGGAAATAATTCCAAAGTACTTGATGTTTTAAAGGAAACCAATACTCCTGCTGT TTTGCTTCCAACTAATTTTTCAGAAGGTTTCACTCCAAAAACTCCTGAAGAGAGAGTAAATGCAATGAACCAGCTAATTG AAGATACAAAAGGTATTGATTATGTTGCAGATTTAATTTTGGATCCTGTAAACAGCAGCAGTATTGTTGAATCAATTATG GCCTGCTTTGAATTTCATAAAACAAATAAGGCACCAATGTTTTTTGGAGTTGGAAATGTTACTGAACTGATGGATGCCGA TTCGGGAGGAGTTAATGTTCTTCTTGCAGGAATAGGTATGGAATTGGGCGTAAGCATATTATTCACTCCAGAAGAAAGTG GAAAAACAAGGGGCAGTGTTTATGAATTATCAACAGCATCTAAAATGATGTTTTTGGCTAAACATAGACAATCTATTCCA AAAGACCTGGGAATTAACCTTGTTGAATTTAAAGATAAGCATAAAAGATTGGATATAATTGAAAATGAAACTGATGGGGT TCCTGAAGTTAAACAGGCAAAACCTATGAAATTTGTAAGAGATAAAGCAGGGAGTTTCAAAATCAGTGTTGATTATGGAA CTACTGTTAAATCCAGCAGGATTATAGCTACACATTTTAAAAAGAACAAAGCTGATCTGGTAATTGTTGGAAATACTGCA AAAGAAATTTATGAAGAAATAATAAATAAAAAACTTGTAACAAGAATGGAACATGCAGCATATTTGGGCAGTGAGCTTCA AAAAGCACAAATAGCTATGATTACTGGAAAAGAATATGTTCAGGACTTTGATTTATTTAAAAATCCGGATGAATTTAAAA TTTAA
Upstream 100 bases:
>100_bases ATTAATATTGTTAAGTGGAGTATATTTCTTTGTTTTGTAGTTACTTATAATAATTAAATAGTCATATAACTATTAATATT ATGAATAAGTGGGGGAGTTT
Downstream 100 bases:
>100_bases TTCTATTTTCAAAACTTTTAAATAAATGCATCATTAATACTTGTAATTATATAATAATAAAGAAGGTTTGATTGTGCAAA TTGACGATTTATCTGTTAAA
Product: dihydropteroate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MKVLIITGNLAYPLIKNVVANANVEVIIHIADNTQVAAFLTPRIIIDEIKTHFANQLGEIDMILVPGLIKKGTREITKEL GIPTFKGSTDGADLAMVLNLIDQIELSEDKPADKLIEEEKRKEALKFINDFENDEETIKNLLKKPNNIMIGNLPVGEDFP MRVLSEIANAPFLSKEALIHKCQYFVDSGADMIDIGMAAGEDFSDKVPELIDTLRPIVGDRPLSIDTLNAKEIEVAAKHG IDLVLSLDLGNNSKVLDVLKETNTPAVLLPTNFSEGFTPKTPEERVNAMNQLIEDTKGIDYVADLILDPVNSSSIVESIM ACFEFHKTNKAPMFFGVGNVTELMDADSGGVNVLLAGIGMELGVSILFTPEESGKTRGSVYELSTASKMMFLAKHRQSIP KDLGINLVEFKDKHKRLDIIENETDGVPEVKQAKPMKFVRDKAGSFKISVDYGTTVKSSRIIATHFKKNKADLVIVGNTA KEIYEEIINKKLVTRMEHAAYLGSELQKAQIAMITGKEYVQDFDLFKNPDEFKI
Sequences:
>Translated_534_residues MKVLIITGNLAYPLIKNVVANANVEVIIHIADNTQVAAFLTPRIIIDEIKTHFANQLGEIDMILVPGLIKKGTREITKEL GIPTFKGSTDGADLAMVLNLIDQIELSEDKPADKLIEEEKRKEALKFINDFENDEETIKNLLKKPNNIMIGNLPVGEDFP MRVLSEIANAPFLSKEALIHKCQYFVDSGADMIDIGMAAGEDFSDKVPELIDTLRPIVGDRPLSIDTLNAKEIEVAAKHG IDLVLSLDLGNNSKVLDVLKETNTPAVLLPTNFSEGFTPKTPEERVNAMNQLIEDTKGIDYVADLILDPVNSSSIVESIM ACFEFHKTNKAPMFFGVGNVTELMDADSGGVNVLLAGIGMELGVSILFTPEESGKTRGSVYELSTASKMMFLAKHRQSIP KDLGINLVEFKDKHKRLDIIENETDGVPEVKQAKPMKFVRDKAGSFKISVDYGTTVKSSRIIATHFKKNKADLVIVGNTA KEIYEEIINKKLVTRMEHAAYLGSELQKAQIAMITGKEYVQDFDLFKNPDEFKI >Mature_534_residues MKVLIITGNLAYPLIKNVVANANVEVIIHIADNTQVAAFLTPRIIIDEIKTHFANQLGEIDMILVPGLIKKGTREITKEL GIPTFKGSTDGADLAMVLNLIDQIELSEDKPADKLIEEEKRKEALKFINDFENDEETIKNLLKKPNNIMIGNLPVGEDFP MRVLSEIANAPFLSKEALIHKCQYFVDSGADMIDIGMAAGEDFSDKVPELIDTLRPIVGDRPLSIDTLNAKEIEVAAKHG IDLVLSLDLGNNSKVLDVLKETNTPAVLLPTNFSEGFTPKTPEERVNAMNQLIEDTKGIDYVADLILDPVNSSSIVESIM ACFEFHKTNKAPMFFGVGNVTELMDADSGGVNVLLAGIGMELGVSILFTPEESGKTRGSVYELSTASKMMFLAKHRQSIP KDLGINLVEFKDKHKRLDIIENETDGVPEVKQAKPMKFVRDKAGSFKISVDYGTTVKSSRIIATHFKKNKADLVIVGNTA KEIYEEIINKKLVTRMEHAAYLGSELQKAQIAMITGKEYVQDFDLFKNPDEFKI
Specific function: Unknown. Does not possess dihydropteroate synthase (DHPS) activity since it does not catalyze the condensation of 6- hydroxymethyl-7,8-dihydropterin pyrophosphate (DHPP) and 4- aminobenzoate to form 7,8-dihydropteroate [H]
COG id: COG0294
COG function: function code H; Dihydropteroate synthase and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 pterin-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005236 - InterPro: IPR011005 - InterPro: IPR000489 [H]
Pfam domain/function: PF00809 Pterin_bind [H]
EC number: NA
Molecular weight: Translated: 59034; Mature: 59034
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50972 PTERIN_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLIITGNLAYPLIKNVVANANVEVIIHIADNTQVAAFLTPRIIIDEIKTHFANQLGEI CEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCE DMILVPGLIKKGTREITKELGIPTFKGSTDGADLAMVLNLIDQIELSEDKPADKLIEEEK EEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH RKEALKFINDFENDEETIKNLLKKPNNIMIGNLPVGEDFPMRVLSEIANAPFLSKEALIH HHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHH KCQYFVDSGADMIDIGMAAGEDFSDKVPELIDTLRPIVGDRPLSIDTLNAKEIEVAAKHG HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCC IDLVLSLDLGNNSKVLDVLKETNTPAVLLPTNFSEGFTPKTPEERVNAMNQLIEDTKGID CEEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHH YVADLILDPVNSSSIVESIMACFEFHKTNKAPMFFGVGNVTELMDADSGGVNVLLAGIGM HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCCCCEEEEEECCH ELGVSILFTPEESGKTRGSVYELSTASKMMFLAKHRQSIPKDLGINLVEFKDKHKRLDII HHCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCEE ENETDGVPEVKQAKPMKFVRDKAGSFKISVDYGTTVKSSRIIATHFKKNKADLVIVGNTA CCCCCCCCCHHHCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCEEEECCCH KEIYEEIINKKLVTRMEHAAYLGSELQKAQIAMITGKEYVQDFDLFKNPDEFKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKVLIITGNLAYPLIKNVVANANVEVIIHIADNTQVAAFLTPRIIIDEIKTHFANQLGEI CEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCE DMILVPGLIKKGTREITKELGIPTFKGSTDGADLAMVLNLIDQIELSEDKPADKLIEEEK EEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH RKEALKFINDFENDEETIKNLLKKPNNIMIGNLPVGEDFPMRVLSEIANAPFLSKEALIH HHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHH KCQYFVDSGADMIDIGMAAGEDFSDKVPELIDTLRPIVGDRPLSIDTLNAKEIEVAAKHG HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCC IDLVLSLDLGNNSKVLDVLKETNTPAVLLPTNFSEGFTPKTPEERVNAMNQLIEDTKGID CEEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHH YVADLILDPVNSSSIVESIMACFEFHKTNKAPMFFGVGNVTELMDADSGGVNVLLAGIGM HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCCCCEEEEEECCH ELGVSILFTPEESGKTRGSVYELSTASKMMFLAKHRQSIPKDLGINLVEFKDKHKRLDII HHCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCEE ENETDGVPEVKQAKPMKFVRDKAGSFKISVDYGTTVKSSRIIATHFKKNKADLVIVGNTA CCCCCCCCCHHHCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCEEEECCCH KEIYEEIINKKLVTRMEHAAYLGSELQKAQIAMITGKEYVQDFDLFKNPDEFKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]