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The map label for this gene is clpB [C]

Identifier: 148642615

GI number: 148642615

Start: 533457

End: 534314

Strand: Reverse

Name: clpB [C]

Synonym: Msm_0555

Alternate gene names: 148642615

Gene position: 534314-533457 (Counterclockwise)

Preceding gene: 148642616

Following gene: 148642614

Centisome position: 28.83

GC content: 29.72

Gene sequence:

>858_bases
GTGCAAATTGACGATTTATCTGTTAAAAAAATTGACAAAATTCTTTTAAATGAAAATTATGTCCCGGATAACGAGATTTC
AACAACATTATATTTATCTTTTTTACTTGGAAAACCGATGCTTATTGAAGGACCTCCAGGTGTTGGAAAAACACAGCTGG
CTAAAGTAATAGCCAGTGCTTTTGATAGGGATTTCTTCAGGATTCAATGTTATGAAGGTATCACTTTTGAACAGATTGTT
GGAGAATGGAATTATCAAAAACAATTATTACACCTTGAAGCAGCCAAAAACGAATCTGACAATGAAGAAAAAATATTTCA
TGAAGAATTCTTTATTAGGCGTCCTTTATTAAATGCTTTTTTAAATGAAAAGGATTCTGTTTTACTTATTGATGAAATTG
ATAAGGCAGATGAGGAAGTTGAAAGTTTTTTACTTCAGGCATTAGGTGAAAAAGAAATAACTATAAATGATTTAGGAACA
TTCCAGTTAGCAAATGATTTGATTGTTATTTTAACATCTAACTCTCAAAGGTCTTTACTTGATGAAACTAAAGACAGATG
TTTGTTTTTATATATCCCATATCCTTCAGTTGAACGTGAAATTGAAATTGTAAAATCAAGACTTCCTGGTGCTGAAGATG
AAACAGTTTCAAAAATAGTTAAAATAGTGCATGAGATACGTAATCTTAATTTAATGAAAAAACCATCTGTAAGAGGGACT
GTAGATTGGGTTAGATCAGTTTCCAGTTTAGGTACTAAAAATTTCAATAAATCTTTAGAGGACAGTATTGGTGTAGCTAT
TAAAACTGAAAGTGATAAAAAAAGAGTTTTAAAAGACGTAATTCATAAGAAATATTAA

Upstream 100 bases:

>100_bases
AAAAATCCGGATGAATTTAAAATTTAATTCTATTTTCAAAACTTTTAAATAAATGCATCATTAATACTTGTAATTATATA
ATAATAAAGAAGGTTTGATT

Downstream 100 bases:

>100_bases
TTATAATGATATTATGATTGATAAAGTTGCAGATTTGTCTCATCAATTAAGGGAAGTAGGTTTGCCTGTTAGTGTTAGAA
GTACACAGTCAGCTGCTCAA

Product: MoxR-like ATPase

Products: NA

Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; AAA_5 ATPase; MoxR-Like ATPase; AAA Family ATPase; AAA ATPase; ATPase Central Domain-Containing Protein; ATPase AAA Family Protein; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; ATP-Dependent Protease; ATPase Protein; Aaa ATPase; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; ATPase Aaa Family; MoxR-Like ATPase CoxD

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQIDDLSVKKIDKILLNENYVPDNEISTTLYLSFLLGKPMLIEGPPGVGKTQLAKVIASAFDRDFFRIQCYEGITFEQIV
GEWNYQKQLLHLEAAKNESDNEEKIFHEEFFIRRPLLNAFLNEKDSVLLIDEIDKADEEVESFLLQALGEKEITINDLGT
FQLANDLIVILTSNSQRSLLDETKDRCLFLYIPYPSVEREIEIVKSRLPGAEDETVSKIVKIVHEIRNLNLMKKPSVRGT
VDWVRSVSSLGTKNFNKSLEDSIGVAIKTESDKKRVLKDVIHKKY

Sequences:

>Translated_285_residues
MQIDDLSVKKIDKILLNENYVPDNEISTTLYLSFLLGKPMLIEGPPGVGKTQLAKVIASAFDRDFFRIQCYEGITFEQIV
GEWNYQKQLLHLEAAKNESDNEEKIFHEEFFIRRPLLNAFLNEKDSVLLIDEIDKADEEVESFLLQALGEKEITINDLGT
FQLANDLIVILTSNSQRSLLDETKDRCLFLYIPYPSVEREIEIVKSRLPGAEDETVSKIVKIVHEIRNLNLMKKPSVRGT
VDWVRSVSSLGTKNFNKSLEDSIGVAIKTESDKKRVLKDVIHKKY
>Mature_285_residues
MQIDDLSVKKIDKILLNENYVPDNEISTTLYLSFLLGKPMLIEGPPGVGKTQLAKVIASAFDRDFFRIQCYEGITFEQIV
GEWNYQKQLLHLEAAKNESDNEEKIFHEEFFIRRPLLNAFLNEKDSVLLIDEIDKADEEVESFLLQALGEKEITINDLGT
FQLANDLIVILTSNSQRSLLDETKDRCLFLYIPYPSVEREIEIVKSRLPGAEDETVSKIVKIVHEIRNLNLMKKPSVRGT
VDWVRSVSSLGTKNFNKSLEDSIGVAIKTESDKKRVLKDVIHKKY

Specific function: Part Of A Stress-Induced Multi-Chaperone System, It Is Involved In The Recovery Of The Cell From Heat-Induced Damage, In Cooperation With Dnak, Dnaj And Grpe. Acts Before Dnak, In The Processing Of Protein Aggregates. Protein Binding Stimulates The Atpase

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32651; Mature: 32651

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIDDLSVKKIDKILLNENYVPDNEISTTLYLSFLLGKPMLIEGPPGVGKTQLAKVIASA
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
FDRDFFRIQCYEGITFEQIVGEWNYQKQLLHLEAAKNESDNEEKIFHEEFFIRRPLLNAF
HCCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LNEKDSVLLIDEIDKADEEVESFLLQALGEKEITINDLGTFQLANDLIVILTSNSQRSLL
HCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCEEECCCEEEEEECCCHHHHH
DETKDRCLFLYIPYPSVEREIEIVKSRLPGAEDETVSKIVKIVHEIRNLNLMKKPSVRGT
HHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VDWVRSVSSLGTKNFNKSLEDSIGVAIKTESDKKRVLKDVIHKKY
HHHHHHHHHHCCCCCCHHHHHHCCEEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQIDDLSVKKIDKILLNENYVPDNEISTTLYLSFLLGKPMLIEGPPGVGKTQLAKVIASA
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
FDRDFFRIQCYEGITFEQIVGEWNYQKQLLHLEAAKNESDNEEKIFHEEFFIRRPLLNAF
HCCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LNEKDSVLLIDEIDKADEEVESFLLQALGEKEITINDLGTFQLANDLIVILTSNSQRSLL
HCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCEEECCCEEEEEECCCHHHHH
DETKDRCLFLYIPYPSVEREIEIVKSRLPGAEDETVSKIVKIVHEIRNLNLMKKPSVRGT
HHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VDWVRSVSSLGTKNFNKSLEDSIGVAIKTESDKKRVLKDVIHKKY
HHHHHHHHHHCCCCCCHHHHHHCCEEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA