Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642605

Identifier: 148642605

GI number: 148642605

Start: 525255

End: 526547

Strand: Reverse

Name: 148642605

Synonym: Msm_0545

Alternate gene names: NA

Gene position: 526547-525255 (Counterclockwise)

Preceding gene: 148642608

Following gene: 148642603

Centisome position: 28.41

GC content: 24.28

Gene sequence:

>1293_bases
ATGAATTTTAAAAAATATGTTAAATATATTCCTTTTTTGATATTTTTAATCATTTTATTGTGTTATCATTGGAAATTAGC
AGTAGTTACTGCAGATTATCCTACTTTCCAGACAATAGTTTCAAAACATCCTTTATTATCATTAACTAAAAATGGATTTT
TAAGTTATAGGTATGCAACCTGGAGTTCCAGATCTCTTATAGAATTTAATGTAGGGGTATTGGTATCTGTTCCTACAGAA
ATTTGGAGAATATTGGATTCAGTTATTTTTACAGCTATTGCTGTGTTATTAAGTAAATTGCTGGCTAATAATAATGAAAG
TCCTTTCTTTTATAATTGTTTGGCTTGTTTATTTGTAGGTTTATTTATATTAACTTTTTCTAAAATATTGGAATCTGCGG
GTTGGTTAGCAACTACAACAAATTATATATGGCCGATTTGTTTTATATTAATACATTTTTATCTACTTAAAGAATTTATA
TTTAAAAATAAGGACATATCTAAATTTAAAAGGACAATAATATATTTAATTTTAATTATCACATTATTGGAAGCTATTAG
CTCTGAACAGTTACTGGTTATGGTTGGTGGCGCATATTTATTTGCTATAGTTTATTGTTTATATAAAAAGATTGAAATTC
CTAAATTAATTTATTTATTTATAATCATAATTCTTTTTAATTTCATTTATGATTTCTGCTGTCCGGGAAATATAAATAGA
GTAAAAGTAGTTACTAAACTGGGATTTCCGGATTATGCTAATTTCAACATCATAAATAAATTAGATGTAGGGATTAATTA
TTTCTTAAGTTGGATTTTAATGGCAAAAGACTTATTTTCAGTAATTTTCCTAGCTTTGCTTGGTTTTTATACTTATTTAA
TATCTAATAAGAAGAAAATAACTATAATTACTTTAATTCCCTGTTTGGCAGTATTATTTTTTGCATCACTAAGATTCGCA
AATTTCACCACTGTTTATAGTTATTTTGATTTAACTAACTTGAAACATGGTTTATTAAGTTTAGGATTTATAAGAATGCT
GAGCTGTGGTGTGATGTATCTTATAATTACATTAATACCTTTATATTCAATTTATCTGATTTATAAAGACAATAAAAAGT
TAGGTTATTTTATATTTGTATTATTAATATTGGGTTTCGGATCTGTGATTATTTCAGGTTTTACTCCTTCATTAACTAGT
GATGGCAGAATATATTTAAATTATTTATTTGTAATGATAATTTTAGATTATTTGCTGGTTGATAAAATATTGGAATTTAA
AAATAAAAATTAA

Upstream 100 bases:

>100_bases
ATATATTTTTTCTTTAAAGTAGTTAAAATTATTCATGCAAAAATTTTATCATGTTGTTTAAATAATATTAATTATTATTG
ATTTAGCTGGAAATAGTGAT

Downstream 100 bases:

>100_bases
ATTTTATATCTCTTTATATTAGAAAAAATATTTTTTTTAATATAATGGGAGATGTTTTGCAGGTACAGTTGACTTATTCA
TATCTGCATTATTAACTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MNFKKYVKYIPFLIFLIILLCYHWKLAVVTADYPTFQTIVSKHPLLSLTKNGFLSYRYATWSSRSLIEFNVGVLVSVPTE
IWRILDSVIFTAIAVLLSKLLANNNESPFFYNCLACLFVGLFILTFSKILESAGWLATTTNYIWPICFILIHFYLLKEFI
FKNKDISKFKRTIIYLILIITLLEAISSEQLLVMVGGAYLFAIVYCLYKKIEIPKLIYLFIIIILFNFIYDFCCPGNINR
VKVVTKLGFPDYANFNIINKLDVGINYFLSWILMAKDLFSVIFLALLGFYTYLISNKKKITIITLIPCLAVLFFASLRFA
NFTTVYSYFDLTNLKHGLLSLGFIRMLSCGVMYLIITLIPLYSIYLIYKDNKKLGYFIFVLLILGFGSVIISGFTPSLTS
DGRIYLNYLFVMIILDYLLVDKILEFKNKN

Sequences:

>Translated_430_residues
MNFKKYVKYIPFLIFLIILLCYHWKLAVVTADYPTFQTIVSKHPLLSLTKNGFLSYRYATWSSRSLIEFNVGVLVSVPTE
IWRILDSVIFTAIAVLLSKLLANNNESPFFYNCLACLFVGLFILTFSKILESAGWLATTTNYIWPICFILIHFYLLKEFI
FKNKDISKFKRTIIYLILIITLLEAISSEQLLVMVGGAYLFAIVYCLYKKIEIPKLIYLFIIIILFNFIYDFCCPGNINR
VKVVTKLGFPDYANFNIINKLDVGINYFLSWILMAKDLFSVIFLALLGFYTYLISNKKKITIITLIPCLAVLFFASLRFA
NFTTVYSYFDLTNLKHGLLSLGFIRMLSCGVMYLIITLIPLYSIYLIYKDNKKLGYFIFVLLILGFGSVIISGFTPSLTS
DGRIYLNYLFVMIILDYLLVDKILEFKNKN
>Mature_430_residues
MNFKKYVKYIPFLIFLIILLCYHWKLAVVTADYPTFQTIVSKHPLLSLTKNGFLSYRYATWSSRSLIEFNVGVLVSVPTE
IWRILDSVIFTAIAVLLSKLLANNNESPFFYNCLACLFVGLFILTFSKILESAGWLATTTNYIWPICFILIHFYLLKEFI
FKNKDISKFKRTIIYLILIITLLEAISSEQLLVMVGGAYLFAIVYCLYKKIEIPKLIYLFIIIILFNFIYDFCCPGNINR
VKVVTKLGFPDYANFNIINKLDVGINYFLSWILMAKDLFSVIFLALLGFYTYLISNKKKITIITLIPCLAVLFFASLRFA
NFTTVYSYFDLTNLKHGLLSLGFIRMLSCGVMYLIITLIPLYSIYLIYKDNKKLGYFIFVLLILGFGSVIISGFTPSLTS
DGRIYLNYLFVMIILDYLLVDKILEFKNKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49748; Mature: 49748

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKKYVKYIPFLIFLIILLCYHWKLAVVTADYPTFQTIVSKHPLLSLTKNGFLSYRYAT
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCCCEEECCCCEEEEEEC
WSSRSLIEFNVGVLVSVPTEIWRILDSVIFTAIAVLLSKLLANNNESPFFYNCLACLFVG
CCCCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LFILTFSKILESAGWLATTTNYIWPICFILIHFYLLKEFIFKNKDISKFKRTIIYLILII
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TLLEAISSEQLLVMVGGAYLFAIVYCLYKKIEIPKLIYLFIIIILFNFIYDFCCPGNINR
HHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
VKVVTKLGFPDYANFNIINKLDVGINYFLSWILMAKDLFSVIFLALLGFYTYLISNKKKI
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TIITLIPCLAVLFFASLRFANFTTVYSYFDLTNLKHGLLSLGFIRMLSCGVMYLIITLIP
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYSIYLIYKDNKKLGYFIFVLLILGFGSVIISGFTPSLTSDGRIYLNYLFVMIILDYLLV
HHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DKILEFKNKN
HHHHHHCCCC
>Mature Secondary Structure
MNFKKYVKYIPFLIFLIILLCYHWKLAVVTADYPTFQTIVSKHPLLSLTKNGFLSYRYAT
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCCCEEECCCCEEEEEEC
WSSRSLIEFNVGVLVSVPTEIWRILDSVIFTAIAVLLSKLLANNNESPFFYNCLACLFVG
CCCCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LFILTFSKILESAGWLATTTNYIWPICFILIHFYLLKEFIFKNKDISKFKRTIIYLILII
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TLLEAISSEQLLVMVGGAYLFAIVYCLYKKIEIPKLIYLFIIIILFNFIYDFCCPGNINR
HHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
VKVVTKLGFPDYANFNIINKLDVGINYFLSWILMAKDLFSVIFLALLGFYTYLISNKKKI
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TIITLIPCLAVLFFASLRFANFTTVYSYFDLTNLKHGLLSLGFIRMLSCGVMYLIITLIP
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYSIYLIYKDNKKLGYFIFVLLILGFGSVIISGFTPSLTSDGRIYLNYLFVMIILDYLLV
HHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DKILEFKNKN
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA