| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642595
Identifier: 148642595
GI number: 148642595
Start: 510121
End: 510648
Strand: Reverse
Name: 148642595
Synonym: Msm_0535
Alternate gene names: NA
Gene position: 510648-510121 (Counterclockwise)
Preceding gene: 148642596
Following gene: 148642591
Centisome position: 27.56
GC content: 22.54
Gene sequence:
>528_bases ATGATAAATACATGGGGAAAAGAAGAAATTACAAAGTTAAATTATGAATTTAGACAAGATGGAATATATGATAAAAAAAC TTCAAAAAAGTTAAAATTAAAATTTCTTGAATATAATCAGGGACTATCAATGAATTTTGGTTTTTCAAGACATAATATTA ACATTGATTTTGAAAAAAAGATAATGGAAGGCTGTATAAATAAAAATATGACGAATAAAGATATTGAAATAGTATTTGAA TTACTTGAAAAATATCATATTTATCAATTAAATAGTGGAAAATATTGGAAAAAATTAACTTATCATTCGTCATCGTATTT TGATGGATATGAATGGAGTCTTTATCTAGTCTTTGAAAGAGATAAATATTTGCGGATTTTTAATGGTAATGATTATCCAG ATATTTTCACGCATTTAGCTCAGGAGATCATTGATTTAACAGGAAAAGATATTTTAAATGTAAATTCTATCGATGAAAAA GATTTTAAATTATATAAAAAATATGGGGATGAAATATTAAATGAATAA
Upstream 100 bases:
>100_bases TCCGAATCAATAATATTGAATCCAGAAATGTTTAAAAGCTAATATGGATATTTCAAGAAATATTCCACATATAAAAAAAA TATCTGGAGGGAATATATGA
Downstream 100 bases:
>100_bases ATGGATGATGCCATAAATAATAAAATTTTAGTATGGATTATAACTTGAGATTAATAAAAAATTAAGATAAAACTTTGAAA ATGTGATTTCAATGGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MINTWGKEEITKLNYEFRQDGIYDKKTSKKLKLKFLEYNQGLSMNFGFSRHNINIDFEKKIMEGCINKNMTNKDIEIVFE LLEKYHIYQLNSGKYWKKLTYHSSSYFDGYEWSLYLVFERDKYLRIFNGNDYPDIFTHLAQEIIDLTGKDILNVNSIDEK DFKLYKKYGDEILNE
Sequences:
>Translated_175_residues MINTWGKEEITKLNYEFRQDGIYDKKTSKKLKLKFLEYNQGLSMNFGFSRHNINIDFEKKIMEGCINKNMTNKDIEIVFE LLEKYHIYQLNSGKYWKKLTYHSSSYFDGYEWSLYLVFERDKYLRIFNGNDYPDIFTHLAQEIIDLTGKDILNVNSIDEK DFKLYKKYGDEILNE >Mature_175_residues MINTWGKEEITKLNYEFRQDGIYDKKTSKKLKLKFLEYNQGLSMNFGFSRHNINIDFEKKIMEGCINKNMTNKDIEIVFE LLEKYHIYQLNSGKYWKKLTYHSSSYFDGYEWSLYLVFERDKYLRIFNGNDYPDIFTHLAQEIIDLTGKDILNVNSIDEK DFKLYKKYGDEILNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21133; Mature: 21133
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINTWGKEEITKLNYEFRQDGIYDKKTSKKLKLKFLEYNQGLSMNFGFSRHNINIDFEKK CCCCCCCHHHHHHCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEECCCEECEECCCHHHH IMEGCINKNMTNKDIEIVFELLEKYHIYQLNSGKYWKKLTYHSSSYFDGYEWSLYLVFER HHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEEEC DKYLRIFNGNDYPDIFTHLAQEIIDLTGKDILNVNSIDEKDFKLYKKYGDEILNE CCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MINTWGKEEITKLNYEFRQDGIYDKKTSKKLKLKFLEYNQGLSMNFGFSRHNINIDFEKK CCCCCCCHHHHHHCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEECCCEECEECCCHHHH IMEGCINKNMTNKDIEIVFELLEKYHIYQLNSGKYWKKLTYHSSSYFDGYEWSLYLVFER HHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEEEC DKYLRIFNGNDYPDIFTHLAQEIIDLTGKDILNVNSIDEKDFKLYKKYGDEILNE CCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA