Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148642596

Identifier: 148642596

GI number: 148642596

Start: 510707

End: 511780

Strand: Reverse

Name: 148642596

Synonym: Msm_0536

Alternate gene names: NA

Gene position: 511780-510707 (Counterclockwise)

Preceding gene: 148642597

Following gene: 148642595

Centisome position: 27.62

GC content: 26.16

Gene sequence:

>1074_bases
ATGGAATTATATAATCATCTGTTTAATTTCTTCGTATTCTTAAAATCTGGTGAAGAACAAAAACCCGTTAAAGAGGATAT
TATATACTTTAGACAAAATAATATTCAAGTTGGTGTTAATCCTAAAATAATTCAACTATTAATGTATTTAATAGCACTTT
ACAGCCAAAATAATATGTTAAGCAGTTCAGGATACTTTAAAAATATTTTAGATGAAGTTTCTAAATTTAATAATTATTTA
AATCATCTTGTTGATGATGAAATAGATGAACAAAATGTGGTTGAATTAAAAAATGAAATGGGGGTTGATAATTCACGATT
AGAGGAATTAACAAAAGAAGAAATAACTCCAATAATGCAAATTGAATTTTTAAACATGTTAAAAGAGTCCAGATTATATA
TGCCGGTTAGTTATAGTAAAAATATGTTTGAGGGTATTGAAAGTGCAAAAGTAGGTGATGTGATTGGACCTACTGTCCAA
ATTGTGTTTAATATTGAATTTTTAACTGATGATAAAGGAAATAAAGCAGTTCCTTTATTTACTAGTGATGAAATGATGGA
AGCTGCAGATTTTAGAAGTTCAACATATGTATTATATATGGGTGATTTGGCAGATATGTTAAAACAAACTGATAGATATT
CTTTAATTGCAATTAATCCATTTACAGATTATAATATTAATGTGCCTATGGAAACTTTTTTAAGTTTATTTAATGACGAA
AATGAAGTTATTGATATAAGAAATGATGAAATAAGAGAATTGTTACGTCAAGATTCTTTATCAGAAGACAAATTAAATGA
ATTTGGTGAAAAATTATTAACTTCAATAATGATTACTGGTTGTGTTGATGCTGATGGTACAAATTTTGTTTTAATATGGG
ATGACGATAATAAATCGCATTTGCCTTTATTCACAGACATTGATGAGTTTAAAAAGATTTTTAATAATTATGAAAGAGAT
ATTTATCCCCAAGCATATCAATTTAAAGACCTGGTAAATGTTGCAAATGAAAATATTGTAATAAATCCCGCATCCGAATC
AATAATATTGAATCCAGAAATGTTTAAAAGCTAA

Upstream 100 bases:

>100_bases
AGATTTATGCTGTGATATTTTCAAATATACTTATGATGTTGACATATTAACTTCAAGTTATTTCAAGCTTGCAGATTATT
TATATCACACAAATCAGAAT

Downstream 100 bases:

>100_bases
TATGGATATTTCAAGAAATATTCCACATATAAAAAAAATATCTGGAGGGAATATATGAATGATAAATACATGGGGAAAAG
AAGAAATTACAAAGTTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MELYNHLFNFFVFLKSGEEQKPVKEDIIYFRQNNIQVGVNPKIIQLLMYLIALYSQNNMLSSSGYFKNILDEVSKFNNYL
NHLVDDEIDEQNVVELKNEMGVDNSRLEELTKEEITPIMQIEFLNMLKESRLYMPVSYSKNMFEGIESAKVGDVIGPTVQ
IVFNIEFLTDDKGNKAVPLFTSDEMMEAADFRSSTYVLYMGDLADMLKQTDRYSLIAINPFTDYNINVPMETFLSLFNDE
NEVIDIRNDEIRELLRQDSLSEDKLNEFGEKLLTSIMITGCVDADGTNFVLIWDDDNKSHLPLFTDIDEFKKIFNNYERD
IYPQAYQFKDLVNVANENIVINPASESIILNPEMFKS

Sequences:

>Translated_357_residues
MELYNHLFNFFVFLKSGEEQKPVKEDIIYFRQNNIQVGVNPKIIQLLMYLIALYSQNNMLSSSGYFKNILDEVSKFNNYL
NHLVDDEIDEQNVVELKNEMGVDNSRLEELTKEEITPIMQIEFLNMLKESRLYMPVSYSKNMFEGIESAKVGDVIGPTVQ
IVFNIEFLTDDKGNKAVPLFTSDEMMEAADFRSSTYVLYMGDLADMLKQTDRYSLIAINPFTDYNINVPMETFLSLFNDE
NEVIDIRNDEIRELLRQDSLSEDKLNEFGEKLLTSIMITGCVDADGTNFVLIWDDDNKSHLPLFTDIDEFKKIFNNYERD
IYPQAYQFKDLVNVANENIVINPASESIILNPEMFKS
>Mature_357_residues
MELYNHLFNFFVFLKSGEEQKPVKEDIIYFRQNNIQVGVNPKIIQLLMYLIALYSQNNMLSSSGYFKNILDEVSKFNNYL
NHLVDDEIDEQNVVELKNEMGVDNSRLEELTKEEITPIMQIEFLNMLKESRLYMPVSYSKNMFEGIESAKVGDVIGPTVQ
IVFNIEFLTDDKGNKAVPLFTSDEMMEAADFRSSTYVLYMGDLADMLKQTDRYSLIAINPFTDYNINVPMETFLSLFNDE
NEVIDIRNDEIRELLRQDSLSEDKLNEFGEKLLTSIMITGCVDADGTNFVLIWDDDNKSHLPLFTDIDEFKKIFNNYERD
IYPQAYQFKDLVNVANENIVINPASESIILNPEMFKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41444; Mature: 41444

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYNHLFNFFVFLKSGEEQKPVKEDIIYFRQNNIQVGVNPKIIQLLMYLIALYSQNNML
CCHHHHHHHHHHHHCCCCCCCCHHHHHEEEECCCEEECCCHHHHHHHHHHHHHHCCCCCC
SSSGYFKNILDEVSKFNNYLNHLVDDEIDEQNVVELKNEMGVDNSRLEELTKEEITPIMQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
IEFLNMLKESRLYMPVSYSKNMFEGIESAKVGDVIGPTVQIVFNIEFLTDDKGNKAVPLF
HHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEE
TSDEMMEAADFRSSTYVLYMGDLADMLKQTDRYSLIAINPFTDYNINVPMETFLSLFNDE
CCHHHHHHHHCCCCEEEEEECHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHCCC
NEVIDIRNDEIRELLRQDSLSEDKLNEFGEKLLTSIMITGCVDADGTNFVLIWDDDNKSH
CCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCC
LPLFTDIDEFKKIFNNYERDIYPQAYQFKDLVNVANENIVINPASESIILNPEMFKS
CCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCEEECHHHHCC
>Mature Secondary Structure
MELYNHLFNFFVFLKSGEEQKPVKEDIIYFRQNNIQVGVNPKIIQLLMYLIALYSQNNML
CCHHHHHHHHHHHHCCCCCCCCHHHHHEEEECCCEEECCCHHHHHHHHHHHHHHCCCCCC
SSSGYFKNILDEVSKFNNYLNHLVDDEIDEQNVVELKNEMGVDNSRLEELTKEEITPIMQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
IEFLNMLKESRLYMPVSYSKNMFEGIESAKVGDVIGPTVQIVFNIEFLTDDKGNKAVPLF
HHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEE
TSDEMMEAADFRSSTYVLYMGDLADMLKQTDRYSLIAINPFTDYNINVPMETFLSLFNDE
CCHHHHHHHHCCCCEEEEEECHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHCCC
NEVIDIRNDEIRELLRQDSLSEDKLNEFGEKLLTSIMITGCVDADGTNFVLIWDDDNKSH
CCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCC
LPLFTDIDEFKKIFNNYERDIYPQAYQFKDLVNVANENIVINPASESIILNPEMFKS
CCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA