| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642522
Identifier: 148642522
GI number: 148642522
Start: 441306
End: 442016
Strand: Reverse
Name: 148642522
Synonym: Msm_0462
Alternate gene names: NA
Gene position: 442016-441306 (Counterclockwise)
Preceding gene: 148642523
Following gene: 148642519
Centisome position: 23.85
GC content: 33.19
Gene sequence:
>711_bases ATGGGTTTTATTTCAAAATTATTTAATACAGATAGTGATGAATTCAAGGAAGTTAGAGTTGATAGGGAAGTCCTTGAATC TGTAATTTATTATGCTAAAAAAGCGTATCCTAATGAATTTTTAGCTTTTTTTGACGGTAAAATCAAAGATAAAATACTTT ATATTACTAGTCTGATTTTTTTACCTGGTGAAACCTGTGATGTTGGAGCTGTTGTCCATACTGAGATGCTGCCGCCTACT TTAAAATACTGGGGATCAGTTCATTCCCATCCGGGACCAAGTGCACATCCTTCCGGTGCAGATTTAAAAACATTTTCTAA AAATGGTTTATTTCACATGATTGTCTGTTTGCCCTATAGCTTGGAAACATTTATGGCATATGACAAGTATGGAGAACCTA TGGATTATACTGTAGGGGAATATGCTGATGAAATTGACGGAGACATTAGCGAATTTTTTGATGAAGACGATGTTTTAAAA GATGGTGAAGAGTTAAAACCGGGATTTTTTGATGATGAAGATGATTTTGACTTGGAAGACGAAGATATAGATCAGGATTA CAGGGAATACGAGATGAAAACTCAAAACAGTAATCCTACAATAATTTCCAATATAGAATTGCCTCCTCTTTGTGATGGAG ATAATATTCAAATTGAATTAGATGAAAACGGAAATATTAAACGTATTTATAAGCTTCCAAAAGATGAATAA
Upstream 100 bases:
>100_bases AATCAGGTATCTTACCGTAGCTTTTTATTTGAGGATTTTGAAATTCCAATTTTCAGCGAAAACTTTTTTAAGGATATAAA TATAATTTAATTGTGATATT
Downstream 100 bases:
>100_bases TTCTCTAATTTTTTATTTATTTTTAAAATCTTAATTCTGTAGTTAATGTTGAATTTTAAGTGTATTTTTCATTAAAAAAC AAATAATGGTAGTTTATAAT
Product: metal-dependent protease
Products: NA
Alternate protein names: AMM-Like Protein. Metallo Peptidase. MEROPS Family; Mov34/Mpn/Pad-1 Family Protein; Mov34/MPN/PAD-1 Family Protein; Metalloprotease; Mov34 Family Protein; Metal-Dependent Protease; Mov34-MPN-PAD-1 Superfamily Protein
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MGFISKLFNTDSDEFKEVRVDREVLESVIYYAKKAYPNEFLAFFDGKIKDKILYITSLIFLPGETCDVGAVVHTEMLPPT LKYWGSVHSHPGPSAHPSGADLKTFSKNGLFHMIVCLPYSLETFMAYDKYGEPMDYTVGEYADEIDGDISEFFDEDDVLK DGEELKPGFFDDEDDFDLEDEDIDQDYREYEMKTQNSNPTIISNIELPPLCDGDNIQIELDENGNIKRIYKLPKDE
Sequences:
>Translated_236_residues MGFISKLFNTDSDEFKEVRVDREVLESVIYYAKKAYPNEFLAFFDGKIKDKILYITSLIFLPGETCDVGAVVHTEMLPPT LKYWGSVHSHPGPSAHPSGADLKTFSKNGLFHMIVCLPYSLETFMAYDKYGEPMDYTVGEYADEIDGDISEFFDEDDVLK DGEELKPGFFDDEDDFDLEDEDIDQDYREYEMKTQNSNPTIISNIELPPLCDGDNIQIELDENGNIKRIYKLPKDE >Mature_235_residues GFISKLFNTDSDEFKEVRVDREVLESVIYYAKKAYPNEFLAFFDGKIKDKILYITSLIFLPGETCDVGAVVHTEMLPPTL KYWGSVHSHPGPSAHPSGADLKTFSKNGLFHMIVCLPYSLETFMAYDKYGEPMDYTVGEYADEIDGDISEFFDEDDVLKD GEELKPGFFDDEDDFDLEDEDIDQDYREYEMKTQNSNPTIISNIELPPLCDGDNIQIELDENGNIKRIYKLPKDE
Specific function: Unknown
COG id: COG1310
COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27058; Mature: 26927
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFISKLFNTDSDEFKEVRVDREVLESVIYYAKKAYPNEFLAFFDGKIKDKILYITSLIF CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHEEHHHHH LPGETCDVGAVVHTEMLPPTLKYWGSVHSHPGPSAHPSGADLKTFSKNGLFHMIVCLPYS CCCCCCCCCCEEHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCH LETFMAYDKYGEPMDYTVGEYADEIDGDISEFFDEDDVLKDGEELKPGFFDDEDDFDLED HHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCC EDIDQDYREYEMKTQNSNPTIISNIELPPLCDGDNIQIELDENGNIKRIYKLPKDE CCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCC >Mature Secondary Structure GFISKLFNTDSDEFKEVRVDREVLESVIYYAKKAYPNEFLAFFDGKIKDKILYITSLIF CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHEEHHHHH LPGETCDVGAVVHTEMLPPTLKYWGSVHSHPGPSAHPSGADLKTFSKNGLFHMIVCLPYS CCCCCCCCCCEEHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCH LETFMAYDKYGEPMDYTVGEYADEIDGDISEFFDEDDVLKDGEELKPGFFDDEDDFDLED HHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCC EDIDQDYREYEMKTQNSNPTIISNIELPPLCDGDNIQIELDENGNIKRIYKLPKDE CCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA