| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642523
Identifier: 148642523
GI number: 148642523
Start: 442027
End: 442746
Strand: Reverse
Name: 148642523
Synonym: Msm_0463
Alternate gene names: NA
Gene position: 442746-442027 (Counterclockwise)
Preceding gene: 148642524
Following gene: 148642522
Centisome position: 23.89
GC content: 28.89
Gene sequence:
>720_bases ATGAAGGAATATGAAGTTTACGGGGATTTGAAAGTTCCTGTAAACTCAAGAATTATCTTAAGACTGGATGGGAGAAGTTT CCATTCATTAGCTAAAAATTTAAACCTTGAAAAACCCTATGATGAAGATTTTGCAGGATTGATGGTTAAAGTGTCTAAAG ATTTATTCAATGAGTTTGCTCCAGTATTTATTTACACATTTTCAGATGAAATAAGCATTCTTTTGGATAATATTCCATTT AATGGCAGAATTGAAAAAATAAATTCAGTAGTAGCCAGTTTTGCAGCCAGTTCATTTACATACAATTTAAATAAGGAAAT TGCCAAGCCGGTTGCATTTGACAGCAGAATTATTCCGATAAATGATAAGGATATTCCTAAATATTTTAAATGGAGACAGG ACGAGGCCTGGAGAAACTGCATAAATGCTTATGGAATTCATATTTTAAAATCAAAATATAGTGATAAAACAGCTAATGAA AAAATAAAAGGATTGAAGTCTTCAGATATCCATGAACTCTTATTTAATGAAGGGATAAATTTAAACAATGTTGATAATTG GAAAAAACGGGGAATAGCTATTTATAAACAAAATAAAGAAATCGTAGGTTACAATAAAAAGGAAAATAAAAATCAGGTAT CTTACCGTAGCTTTTTATTTGAGGATTTTGAAATTCCAATTTTCAGCGAAAACTTTTTTAAGGATATAAATATAATTTAA
Upstream 100 bases:
>100_bases CCCATGCAGTGCAAATCCGAAAACCAGTATGCTGGCTGCACTTTCCGCAATTAAATTGCTTAAAAGTTTCAATGAATCCA TTACTGTAGGATTGTAGGCA
Downstream 100 bases:
>100_bases TTGTGATATTATGGGTTTTATTTCAAAATTATTTAATACAGATAGTGATGAATTCAAGGAAGTTAGAGTTGATAGGGAAG TCCTTGAATCTGTAATTTAT
Product: tRNA(His) guanylyltransferase
Products: NA
Alternate protein names: TRNA(His)-5-Guanylyltransferase; TRNA(His) Guanylyltransferase; TRNAHis Guanylyltransferase Superfamily; TRNA(His) Guanylyltransferase ThgL
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKEYEVYGDLKVPVNSRIILRLDGRSFHSLAKNLNLEKPYDEDFAGLMVKVSKDLFNEFAPVFIYTFSDEISILLDNIPF NGRIEKINSVVASFAASSFTYNLNKEIAKPVAFDSRIIPINDKDIPKYFKWRQDEAWRNCINAYGIHILKSKYSDKTANE KIKGLKSSDIHELLFNEGINLNNVDNWKKRGIAIYKQNKEIVGYNKKENKNQVSYRSFLFEDFEIPIFSENFFKDINII
Sequences:
>Translated_239_residues MKEYEVYGDLKVPVNSRIILRLDGRSFHSLAKNLNLEKPYDEDFAGLMVKVSKDLFNEFAPVFIYTFSDEISILLDNIPF NGRIEKINSVVASFAASSFTYNLNKEIAKPVAFDSRIIPINDKDIPKYFKWRQDEAWRNCINAYGIHILKSKYSDKTANE KIKGLKSSDIHELLFNEGINLNNVDNWKKRGIAIYKQNKEIVGYNKKENKNQVSYRSFLFEDFEIPIFSENFFKDINII >Mature_239_residues MKEYEVYGDLKVPVNSRIILRLDGRSFHSLAKNLNLEKPYDEDFAGLMVKVSKDLFNEFAPVFIYTFSDEISILLDNIPF NGRIEKINSVVASFAASSFTYNLNKEIAKPVAFDSRIIPINDKDIPKYFKWRQDEAWRNCINAYGIHILKSKYSDKTANE KIKGLKSSDIHELLFNEGINLNNVDNWKKRGIAIYKQNKEIVGYNKKENKNQVSYRSFLFEDFEIPIFSENFFKDINII
Specific function: Unknown
COG id: COG4021
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI89242148, Length=199, Percent_Identity=29.6482412060301, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321461, Length=214, Percent_Identity=28.5046728971963, Blast_Score=65, Evalue=6e-12, Organism=Drosophila melanogaster, GI19921364, Length=205, Percent_Identity=29.2682926829268, Blast_Score=84, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27878; Mature: 27878
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEYEVYGDLKVPVNSRIILRLDGRSFHSLAKNLNLEKPYDEDFAGLMVKVSKDLFNEFA CCCEEEEECEECCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC PVFIYTFSDEISILLDNIPFNGRIEKINSVVASFAASSFTYNLNKEIAKPVAFDSRIIPI CEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHCCCCCCCEEEEC NDKDIPKYFKWRQDEAWRNCINAYGIHILKSKYSDKTANEKIKGLKSSDIHELLFNEGIN CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCC LNNVDNWKKRGIAIYKQNKEIVGYNKKENKNQVSYRSFLFEDFEIPIFSENFFKDINII CCCCCCHHHCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCCCEECHHHHHCCCCC >Mature Secondary Structure MKEYEVYGDLKVPVNSRIILRLDGRSFHSLAKNLNLEKPYDEDFAGLMVKVSKDLFNEFA CCCEEEEECEECCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC PVFIYTFSDEISILLDNIPFNGRIEKINSVVASFAASSFTYNLNKEIAKPVAFDSRIIPI CEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHCCCCCCCEEEEC NDKDIPKYFKWRQDEAWRNCINAYGIHILKSKYSDKTANEKIKGLKSSDIHELLFNEGIN CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHCCCC LNNVDNWKKRGIAIYKQNKEIVGYNKKENKNQVSYRSFLFEDFEIPIFSENFFKDINII CCCCCCHHHCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCCCEECHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA