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The map label for this gene is 148642512

Identifier: 148642512

GI number: 148642512

Start: 430240

End: 431505

Strand: Reverse

Name: 148642512

Synonym: Msm_0452

Alternate gene names: NA

Gene position: 431505-430240 (Counterclockwise)

Preceding gene: 148642515

Following gene: 148642511

Centisome position: 23.28

GC content: 31.67

Gene sequence:

>1266_bases
GTGATTTTAATTAAATATTTGCATATTGGGATTGATGATACTGACTCTCCAGACGGTATGTGTACTACTTATTTGGCCTG
CCATATTATTGATAAATTAAAGGAAGTAGGTATTGAAATTGTTGGTTGTCCTCGTTTAATTAGATTAAATCCATTTGCAA
GATTCAAAACACGGGGAAACGGCGGTGTTGCTTTTAAAATATTAAATGATGATAAATCTGATTTAGCTAAGAAAATAGTT
TTGGATGAAGTGGAAAAATTAGCTATGTTTGACTGTGATAATACAAATCCTGGTGTTGTATTTTATGGTGGTGAAATAAC
TGATGAAATGGTTGAATATTCATTTAAGGCTATTTATTCATTTATCACAATTAAGGAAGCTGAAGAATTTGGAAATTCTA
TCGGCTGTGAACTTCATAAGTTTAAGAAAGGAAGGGGAATTATTGGATCTATTGCAGCTATTGGGCTGCCTTTGGAGGAT
TTCACTTATGAACTGTTGGCGTATAGGGTGCCTGAAAATTATGGTACTAAAAGACACATTGATTATGATTCCGTTTATTT
GATGGATAGGGAAACTTATCCTGAAACTTTTGAAAATGTTGATTATAGTGAAGATTATATAGCTATAGAACCTAAAACTC
CATGTCCTGTTTTGTATGGTATCAGATCAAACACTGTTGAGGCTCTTGAGAGAGCTAAAAAAATAGTTCTGGTTGAAGAA
CCTGTGGAAAATTATTGCATTTTCAAGACTAATCAACACACTGATATGCACATTCAAAAAACGGATGATATAGCTAGTAT
GAAACAGTTTGGATGCTATGAAGTTGTGGGAACTGTAAAAAACAAACCAACAATTATTGATGGTGGCCATATGTTTTTTT
ACATTTTTGATGATTCTGGTGAGATTGAATGCGGAGCATATGAACCAACAAAAAATTTTAGAAAACTTGTATCTGATTTA
AGACCGGGGGATATTGTTAAACTCTTCGGGGGAATTGGAGAACAAAATACATTTAATATTGAAAAGTTTCAAGTTGTTAA
ATTAAATGATGTTGAATATAAAAACCCTATTTGTGAATGTGGAAAAAGAATGACTTCTGCTGGAAAAAATAAGGGATTTA
AATGTAAAAAATGCGGAAATAAAATTAATGATAATAAAAAAGTTCCTATTAAAATTTTCAGAAAATTAAAAAATGGTCAG
TTTTATGAAACACCAGTTTCTGCTAGGCGTCATTTGTCAAAACCTATTTGTAGGATGGATTTATAG

Upstream 100 bases:

>100_bases
ATTATCTATTTCTTGTAACATTTTACTTCGATTTAACATAATTTAATCCCTCTATGTAAATATATGTTTATATTATAGTT
TTTTATAATATTAATAATAG

Downstream 100 bases:

>100_bases
AAATTAACCACCATATATTTTTATTTTTTATTTTTATCAGCTCTGATTCTTTATTTAATCGTTCTTATTTTGTGAATTTT
ATTTTAATTTTTAAGGGTTT

Product: DNA-binding protein (regulator)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MILIKYLHIGIDDTDSPDGMCTTYLACHIIDKLKEVGIEIVGCPRLIRLNPFARFKTRGNGGVAFKILNDDKSDLAKKIV
LDEVEKLAMFDCDNTNPGVVFYGGEITDEMVEYSFKAIYSFITIKEAEEFGNSIGCELHKFKKGRGIIGSIAAIGLPLED
FTYELLAYRVPENYGTKRHIDYDSVYLMDRETYPETFENVDYSEDYIAIEPKTPCPVLYGIRSNTVEALERAKKIVLVEE
PVENYCIFKTNQHTDMHIQKTDDIASMKQFGCYEVVGTVKNKPTIIDGGHMFFYIFDDSGEIECGAYEPTKNFRKLVSDL
RPGDIVKLFGGIGEQNTFNIEKFQVVKLNDVEYKNPICECGKRMTSAGKNKGFKCKKCGNKINDNKKVPIKIFRKLKNGQ
FYETPVSARRHLSKPICRMDL

Sequences:

>Translated_421_residues
MILIKYLHIGIDDTDSPDGMCTTYLACHIIDKLKEVGIEIVGCPRLIRLNPFARFKTRGNGGVAFKILNDDKSDLAKKIV
LDEVEKLAMFDCDNTNPGVVFYGGEITDEMVEYSFKAIYSFITIKEAEEFGNSIGCELHKFKKGRGIIGSIAAIGLPLED
FTYELLAYRVPENYGTKRHIDYDSVYLMDRETYPETFENVDYSEDYIAIEPKTPCPVLYGIRSNTVEALERAKKIVLVEE
PVENYCIFKTNQHTDMHIQKTDDIASMKQFGCYEVVGTVKNKPTIIDGGHMFFYIFDDSGEIECGAYEPTKNFRKLVSDL
RPGDIVKLFGGIGEQNTFNIEKFQVVKLNDVEYKNPICECGKRMTSAGKNKGFKCKKCGNKINDNKKVPIKIFRKLKNGQ
FYETPVSARRHLSKPICRMDL
>Mature_421_residues
MILIKYLHIGIDDTDSPDGMCTTYLACHIIDKLKEVGIEIVGCPRLIRLNPFARFKTRGNGGVAFKILNDDKSDLAKKIV
LDEVEKLAMFDCDNTNPGVVFYGGEITDEMVEYSFKAIYSFITIKEAEEFGNSIGCELHKFKKGRGIIGSIAAIGLPLED
FTYELLAYRVPENYGTKRHIDYDSVYLMDRETYPETFENVDYSEDYIAIEPKTPCPVLYGIRSNTVEALERAKKIVLVEE
PVENYCIFKTNQHTDMHIQKTDDIASMKQFGCYEVVGTVKNKPTIIDGGHMFFYIFDDSGEIECGAYEPTKNFRKLVSDL
RPGDIVKLFGGIGEQNTFNIEKFQVVKLNDVEYKNPICECGKRMTSAGKNKGFKCKKCGNKINDNKKVPIKIFRKLKNGQ
FYETPVSARRHLSKPICRMDL

Specific function: Unknown

COG id: COG1571

COG function: function code R; Predicted DNA-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013696
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF08489 DUF1743; PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 47852; Mature: 47852

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIKYLHIGIDDTDSPDGMCTTYLACHIIDKLKEVGIEIVGCPRLIRLNPFARFKTRGN
CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCEEEECCC
GGVAFKILNDDKSDLAKKIVLDEVEKLAMFDCDNTNPGVVFYGGEITDEMVEYSFKAIYS
CCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCHHHHHHHHHHHHHHH
FITIKEAEEFGNSIGCELHKFKKGRGIIGSIAAIGLPLEDFTYELLAYRVPENYGTKRHI
HHHHHHHHHCCCCCCCCHHHHHCCCCCEEEHHHHCCCHHHHHEEHHHEECCCCCCCCEEC
DYDSVYLMDRETYPETFENVDYSEDYIAIEPKTPCPVLYGIRSNTVEALERAKKIVLVEE
CCCCEEEEECCCCCHHHHCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHEEEEEEC
PVENYCIFKTNQHTDMHIQKTDDIASMKQFGCYEVVGTVKNKPTIIDGGHMFFYIFDDSG
CCCCEEEEECCCCCCEEEECCCCHHHHHHCCHHHHHHCCCCCCEEEECCEEEEEEECCCC
EIECGAYEPTKNFRKLVSDLRPGDIVKLFGGIGEQNTFNIEKFQVVKLNDVEYKNPICEC
CEEECCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHH
GKRMTSAGKNKGFKCKKCGNKINDNKKVPIKIFRKLKNGQFYETPVSARRHLSKPICRMD
HHHHHHCCCCCCEEHHHCCCCCCCCCCCHHHHHHHHCCCCEEECCHHHHHHHCCCHHHCC
L
C
>Mature Secondary Structure
MILIKYLHIGIDDTDSPDGMCTTYLACHIIDKLKEVGIEIVGCPRLIRLNPFARFKTRGN
CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCEEEECCC
GGVAFKILNDDKSDLAKKIVLDEVEKLAMFDCDNTNPGVVFYGGEITDEMVEYSFKAIYS
CCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCHHHHHHHHHHHHHHH
FITIKEAEEFGNSIGCELHKFKKGRGIIGSIAAIGLPLEDFTYELLAYRVPENYGTKRHI
HHHHHHHHHCCCCCCCCHHHHHCCCCCEEEHHHHCCCHHHHHEEHHHEECCCCCCCCEEC
DYDSVYLMDRETYPETFENVDYSEDYIAIEPKTPCPVLYGIRSNTVEALERAKKIVLVEE
CCCCEEEEECCCCCHHHHCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHEEEEEEC
PVENYCIFKTNQHTDMHIQKTDDIASMKQFGCYEVVGTVKNKPTIIDGGHMFFYIFDDSG
CCCCEEEEECCCCCCEEEECCCCHHHHHHCCHHHHHHCCCCCCEEEECCEEEEEEECCCC
EIECGAYEPTKNFRKLVSDLRPGDIVKLFGGIGEQNTFNIEKFQVVKLNDVEYKNPICEC
CEEECCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHH
GKRMTSAGKNKGFKCKKCGNKINDNKKVPIKIFRKLKNGQFYETPVSARRHLSKPICRMD
HHHHHHCCCCCCEEHHHCCCCCCCCCCCHHHHHHHHCCCCEEECCHHHHHHHCCCHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]