| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642511
Identifier: 148642511
GI number: 148642511
Start: 429120
End: 430031
Strand: Reverse
Name: 148642511
Synonym: Msm_0451
Alternate gene names: NA
Gene position: 430031-429120 (Counterclockwise)
Preceding gene: 148642512
Following gene: 148642510
Centisome position: 23.21
GC content: 33.55
Gene sequence:
>912_bases TTGGGGTGGGCACAGATTAGCGATAAAAACGAAAAAGTTAAGGGAACTGAGCACATATATCGTGATAAGACTGATAAAAC TATTTTAAAGAAAGCACCATGGAAAGATTATAGATTACATATTACTGTGCTTTTTTTGGTTATTATTTCCGAATTTATAG GACCTGTTGAATTCAATCTTACAAAAGACATTTGTGTTGTAATTATGCCGTTGTTATATGCAATGGTTATTGGTTTGGCT TTGTTCTTATTAAAACCAGTTAAATGGATTACTAAAAAACAATCTAAAATTGCAGAAAGTGCAATGCTGTTATTTATAGG ACCGTTGCTTGCAAAATTAGCAGTAGCTAGTGGTCAGTCATTCCATATTTTACTTGATGTTGGTCCTGCTTTAGTTTTAC AGGAGTTTGGTAATTTGGGAACTGTATTTTTAGCACTTCCTGTGGCATTGCTTTTAGGATTTAAAAAAGAAACTATTGGT ATGACTAATTCTATTGGTCGTGAAACCAATGTGGCAGTTGTTATTGATAAATTTGGATTTGATTCTGCAGAAACTAGGGG AGTTTTAACAGTATTTATTATTGGAACTGTTATTGGAACGTTATACATCAGTTTTCTGTCATGTTTATGTGTATCAGTTT TACCACTTCATCCATATGCATTTGCAATGGCAACAGGGGTAGGCAGTGCAAGTATGAATGCAGCCGCATTAGCTCCATTG TTAAATGCTTTCCCGGCAAGTATGAGTACAAATATTCAGGCATTTGCAGGATTCAGTAATTTAATTTCCTTCTGTGTTGG AATTTATTTCTGTATATTTTTAGCTATTCCATTAGCTCAAAAATTATATGCTTGGCTTGAACCTAAAATTGGAAGAGAAA CTTCTGTTTCTCATTTAGAGGAGGAAAAATAA
Upstream 100 bases:
>100_bases ATTAAAGGAATTTTTGAGCTTGGAATAGTATTAATTTATATAATAGGTCGAATTATGTATTAAGTAATAGGTATTTTAAT ATAATATTTATAAAATTAGG
Downstream 100 bases:
>100_bases TGGTTGATGTAATTGACGGTTCAGAAACAGTTTCAACACATGGTATAATTAATTGGATTTTATTATTGGTTATATTTTCA GTTATCACAGTTGTCGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MGWAQISDKNEKVKGTEHIYRDKTDKTILKKAPWKDYRLHITVLFLVIISEFIGPVEFNLTKDICVVIMPLLYAMVIGLA LFLLKPVKWITKKQSKIAESAMLLFIGPLLAKLAVASGQSFHILLDVGPALVLQEFGNLGTVFLALPVALLLGFKKETIG MTNSIGRETNVAVVIDKFGFDSAETRGVLTVFIIGTVIGTLYISFLSCLCVSVLPLHPYAFAMATGVGSASMNAAALAPL LNAFPASMSTNIQAFAGFSNLISFCVGIYFCIFLAIPLAQKLYAWLEPKIGRETSVSHLEEEK
Sequences:
>Translated_303_residues MGWAQISDKNEKVKGTEHIYRDKTDKTILKKAPWKDYRLHITVLFLVIISEFIGPVEFNLTKDICVVIMPLLYAMVIGLA LFLLKPVKWITKKQSKIAESAMLLFIGPLLAKLAVASGQSFHILLDVGPALVLQEFGNLGTVFLALPVALLLGFKKETIG MTNSIGRETNVAVVIDKFGFDSAETRGVLTVFIIGTVIGTLYISFLSCLCVSVLPLHPYAFAMATGVGSASMNAAALAPL LNAFPASMSTNIQAFAGFSNLISFCVGIYFCIFLAIPLAQKLYAWLEPKIGRETSVSHLEEEK >Mature_302_residues GWAQISDKNEKVKGTEHIYRDKTDKTILKKAPWKDYRLHITVLFLVIISEFIGPVEFNLTKDICVVIMPLLYAMVIGLAL FLLKPVKWITKKQSKIAESAMLLFIGPLLAKLAVASGQSFHILLDVGPALVLQEFGNLGTVFLALPVALLLGFKKETIGM TNSIGRETNVAVVIDKFGFDSAETRGVLTVFIIGTVIGTLYISFLSCLCVSVLPLHPYAFAMATGVGSASMNAAALAPLL NAFPASMSTNIQAFAGFSNLISFCVGIYFCIFLAIPLAQKLYAWLEPKIGRETSVSHLEEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33066; Mature: 32935
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWAQISDKNEKVKGTEHIYRDKTDKTILKKAPWKDYRLHITVLFLVIISEFIGPVEFNL CCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECC TKDICVVIMPLLYAMVIGLALFLLKPVKWITKKQSKIAESAMLLFIGPLLAKLAVASGQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FHILLDVGPALVLQEFGNLGTVFLALPVALLLGFKKETIGMTNSIGRETNVAVVIDKFGF EEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEEEECCCC DSAETRGVLTVFIIGTVIGTLYISFLSCLCVSVLPLHPYAFAMATGVGSASMNAAALAPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHH LNAFPASMSTNIQAFAGFSNLISFCVGIYFCIFLAIPLAQKLYAWLEPKIGRETSVSHLE HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC EEK CCC >Mature Secondary Structure GWAQISDKNEKVKGTEHIYRDKTDKTILKKAPWKDYRLHITVLFLVIISEFIGPVEFNL CCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECC TKDICVVIMPLLYAMVIGLALFLLKPVKWITKKQSKIAESAMLLFIGPLLAKLAVASGQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FHILLDVGPALVLQEFGNLGTVFLALPVALLLGFKKETIGMTNSIGRETNVAVVIDKFGF EEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEEEECCCC DSAETRGVLTVFIIGTVIGTLYISFLSCLCVSVLPLHPYAFAMATGVGSASMNAAALAPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHH LNAFPASMSTNIQAFAGFSNLISFCVGIYFCIFLAIPLAQKLYAWLEPKIGRETSVSHLE HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC EEK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA