| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642508
Identifier: 148642508
GI number: 148642508
Start: 426259
End: 427161
Strand: Reverse
Name: 148642508
Synonym: Msm_0448
Alternate gene names: NA
Gene position: 427161-426259 (Counterclockwise)
Preceding gene: 148642509
Following gene: 148642507
Centisome position: 23.05
GC content: 34.55
Gene sequence:
>903_bases ATGAAAAAAACTGAAGAATTCTTGGAACAGCTTGGAATTAAAAGAGCTTATGGCGATTTTGAATCATTTAAACGTTTTAA TGATGGAGGACAGTATCGTTTTGAGGTTCCAGGAATACAATCTCCAAAAATAATGGATACCTTACTTAAGGAAGCTTCTA AAAATGAAATAACTATTCATCGTATTACTCAAACCAAAGGAATAATGCTGCTTACTGATGAAGAAATTACAGAAATGGTT GACCTGGCTAAAAAATATGAATGTGAACTTTTTTTATCTGTAGGTCCAAGAGCTACCTATGATACCAGTGCAACTGTCCA TACTAAGGAAGGAAGCAGGATAGGATATCGCTTAAGAGGATATGACAATTTAGTTTATGCAATTGAAGACGTTAAAAGAG CTGCCGATTTGGGAGTTCGTGGAATATTATTATATGATGAGGGTTTACTTTGGACTTTAAACCAGATGAGAAAAGCAGGT GAACTTCCGAAATCACTTCATTTCAAAATGTCTGCACATACTGGACATGGAAATCCAGCATCTGCAAAATTACTTGAAGA AAACGGTCTTAATTCTTTCAATCCAGTTAGAGATTTGCAAATTCCTATGATTGCAGCTATTCGTAAAGCAGTGTATATGC CTTTAGATTTGCATACTGAAAATCCGAAATCAACTGGCGGATTTATCAGACATTATGAAGTTCCGAAGATTATTAAAGTA GCTTCTCCAGTATATTTAAAAACAGGAGGTTCAGTAGCACAGTCTCATAATTGGGATACTTCTGAAAAAGAAGCTATTGC TCGTATTAAACAGGTTAAACTGGTCAAAAGAATGATTGACCAATATTATAGTGATGCAATATCTTCTCCTAAAGGATCTA ATGATTTATCTATTCCTGAGTGA
Upstream 100 bases:
>100_bases GTTTGAATCCTGATTTTGATTTAAATAAATTGCTTGTTGTTGATAATATTGAAGATTATTCTATAAAACAACTTATGGAA ACATTAAATGAGTAGATACT
Downstream 100 bases:
>100_bases TTATATGGATATCATAGAAGATGTTTCAAATGCAATAATTAAAGCCAGTACAAATCTCTCTGAAGATAAATTCAATGCAT TAAAAAAAGCCATTTCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKKTEEFLEQLGIKRAYGDFESFKRFNDGGQYRFEVPGIQSPKIMDTLLKEASKNEITIHRITQTKGIMLLTDEEITEMV DLAKKYECELFLSVGPRATYDTSATVHTKEGSRIGYRLRGYDNLVYAIEDVKRAADLGVRGILLYDEGLLWTLNQMRKAG ELPKSLHFKMSAHTGHGNPASAKLLEENGLNSFNPVRDLQIPMIAAIRKAVYMPLDLHTENPKSTGGFIRHYEVPKIIKV ASPVYLKTGGSVAQSHNWDTSEKEAIARIKQVKLVKRMIDQYYSDAISSPKGSNDLSIPE
Sequences:
>Translated_300_residues MKKTEEFLEQLGIKRAYGDFESFKRFNDGGQYRFEVPGIQSPKIMDTLLKEASKNEITIHRITQTKGIMLLTDEEITEMV DLAKKYECELFLSVGPRATYDTSATVHTKEGSRIGYRLRGYDNLVYAIEDVKRAADLGVRGILLYDEGLLWTLNQMRKAG ELPKSLHFKMSAHTGHGNPASAKLLEENGLNSFNPVRDLQIPMIAAIRKAVYMPLDLHTENPKSTGGFIRHYEVPKIIKV ASPVYLKTGGSVAQSHNWDTSEKEAIARIKQVKLVKRMIDQYYSDAISSPKGSNDLSIPE >Mature_300_residues MKKTEEFLEQLGIKRAYGDFESFKRFNDGGQYRFEVPGIQSPKIMDTLLKEASKNEITIHRITQTKGIMLLTDEEITEMV DLAKKYECELFLSVGPRATYDTSATVHTKEGSRIGYRLRGYDNLVYAIEDVKRAADLGVRGILLYDEGLLWTLNQMRKAG ELPKSLHFKMSAHTGHGNPASAKLLEENGLNSFNPVRDLQIPMIAAIRKAVYMPLDLHTENPKSTGGFIRHYEVPKIIKV ASPVYLKTGGSVAQSHNWDTSEKEAIARIKQVKLVKRMIDQYYSDAISSPKGSNDLSIPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33813; Mature: 33813
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTEEFLEQLGIKRAYGDFESFKRFNDGGQYRFEVPGIQSPKIMDTLLKEASKNEITIH CCHHHHHHHHHCCHHHHCCHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEE RITQTKGIMLLTDEEITEMVDLAKKYECELFLSVGPRATYDTSATVHTKEGSRIGYRLRG EEECCCCEEEEECHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEECCCCEEEEEEEC YDNLVYAIEDVKRAADLGVRGILLYDEGLLWTLNQMRKAGELPKSLHFKMSAHTGHGNPA CCCEEHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCHHHEEEEEECCCCCCCH SAKLLEENGLNSFNPVRDLQIPMIAAIRKAVYMPLDLHTENPKSTGGFIRHYEVPKIIKV HHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCHHHHH ASPVYLKTGGSVAQSHNWDTSEKEAIARIKQVKLVKRMIDQYYSDAISSPKGSNDLSIPE CCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKKTEEFLEQLGIKRAYGDFESFKRFNDGGQYRFEVPGIQSPKIMDTLLKEASKNEITIH CCHHHHHHHHHCCHHHHCCHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEE RITQTKGIMLLTDEEITEMVDLAKKYECELFLSVGPRATYDTSATVHTKEGSRIGYRLRG EEECCCCEEEEECHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEECCCCEEEEEEEC YDNLVYAIEDVKRAADLGVRGILLYDEGLLWTLNQMRKAGELPKSLHFKMSAHTGHGNPA CCCEEHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCHHHEEEEEECCCCCCCH SAKLLEENGLNSFNPVRDLQIPMIAAIRKAVYMPLDLHTENPKSTGGFIRHYEVPKIIKV HHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCHHHHH ASPVYLKTGGSVAQSHNWDTSEKEAIARIKQVKLVKRMIDQYYSDAISSPKGSNDLSIPE CCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA