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The map label for this gene is ttdA [C]

Identifier: 148642507

GI number: 148642507

Start: 425382

End: 426254

Strand: Reverse

Name: ttdA [C]

Synonym: Msm_0447

Alternate gene names: 148642507

Gene position: 426254-425382 (Counterclockwise)

Preceding gene: 148642508

Following gene: 148642506

Centisome position: 23.0

GC content: 34.59

Gene sequence:

>873_bases
ATGGATATCATAGAAGATGTTTCAAATGCAATAATTAAAGCCAGTACAAATCTCTCTGAAGATAAATTCAATGCATTAAA
AAAAGCCATTTCTGTTGAAGATAATGAAAATGCTTTGTGGGCTTTAAATCAAATTTTAGAAAATTATAAAGTAGCCAGTA
AGACCAAATTCCCTTTATGTGATGATACAGGAATTCCTCATGTAATCATTGAAATAGGTGAAAAAAGAGAAATCACAGGG
GAGTTAATAGCTCAGATTAATGAGGGAATTGAAAGAGGATTAAATAATTTGCCTGCCCGCCCTATGGCTGTTAAAGGTAA
TGATGTTGAGCGAATTGAACAATCAAAAGGATTGTATAACCGTCCTGGGCAGATGAAAGCAGCATCCTTTTTAATAGATT
CTTTCAGTGAGGATTCAACATATAAAAGAAATATTTCTCCGGACACTTTAAACATCCATTTTATACTGGAAGGAGGAGGT
CCTGAAATAAGGGCAAAGACATATAGGGTATATCATAAAAGATCAATTGAAAATGTAATTGGTACAGCTATCGGCTGGTT
AAGCGAATCACTTAAAATGTTGGGATGCACTCCTTCTGTTCCTGCTGTTGGTATTGGCCGTACACATTATGAGGCATCAT
CATTACTGTTAAAATCAATTGTTTATGGAAATTTAGATTCCCAAAGCGATTTGGAAAATTATGTAACTCAGAAATTAAAC
GAAACAAATATCGGACCATTGGGTTTTGGTGGAAAAACCACAGTTTTAGGTTCATTTGTTAATGTAGGTAATCAAAGGGC
AAGCGGTGTTAGAATTGTTTCAGTCAGACCTTCCTGTTTTGTAGAACCGAGAGTTGCAACATTACATTTATAA

Upstream 100 bases:

>100_bases
AAACAGGTTAAACTGGTCAAAAGAATGATTGACCAATATTATAGTGATGCAATATCTTCTCCTAAAGGATCTAATGATTT
ATCTATTCCTGAGTGATTAT

Downstream 100 bases:

>100_bases
TGGATTATAATTATATTTTAATTATTAAATTGAGGAAATTAAAACAATGTCGGAAAATAATTTTAAAATTAACGAGCATT
CACTAAGAACAGCTATTTCT

Product: fumarate hydratase, alpha subunit

Products: NA

Alternate protein names: Fumarase [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MDIIEDVSNAIIKASTNLSEDKFNALKKAISVEDNENALWALNQILENYKVASKTKFPLCDDTGIPHVIIEIGEKREITG
ELIAQINEGIERGLNNLPARPMAVKGNDVERIEQSKGLYNRPGQMKAASFLIDSFSEDSTYKRNISPDTLNIHFILEGGG
PEIRAKTYRVYHKRSIENVIGTAIGWLSESLKMLGCTPSVPAVGIGRTHYEASSLLLKSIVYGNLDSQSDLENYVTQKLN
ETNIGPLGFGGKTTVLGSFVNVGNQRASGVRIVSVRPSCFVEPRVATLHL

Sequences:

>Translated_290_residues
MDIIEDVSNAIIKASTNLSEDKFNALKKAISVEDNENALWALNQILENYKVASKTKFPLCDDTGIPHVIIEIGEKREITG
ELIAQINEGIERGLNNLPARPMAVKGNDVERIEQSKGLYNRPGQMKAASFLIDSFSEDSTYKRNISPDTLNIHFILEGGG
PEIRAKTYRVYHKRSIENVIGTAIGWLSESLKMLGCTPSVPAVGIGRTHYEASSLLLKSIVYGNLDSQSDLENYVTQKLN
ETNIGPLGFGGKTTVLGSFVNVGNQRASGVRIVSVRPSCFVEPRVATLHL
>Mature_290_residues
MDIIEDVSNAIIKASTNLSEDKFNALKKAISVEDNENALWALNQILENYKVASKTKFPLCDDTGIPHVIIEIGEKREITG
ELIAQINEGIERGLNNLPARPMAVKGNDVERIEQSKGLYNRPGQMKAASFLIDSFSEDSTYKRNISPDTLNIHFILEGGG
PEIRAKTYRVYHKRSIENVIGTAIGWLSESLKMLGCTPSVPAVGIGRTHYEASSLLLKSIVYGNLDSQSDLENYVTQKLN
ETNIGPLGFGGKTTVLGSFVNVGNQRASGVRIVSVRPSCFVEPRVATLHL

Specific function: Unknown

COG id: COG1951

COG function: function code C; Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004646 [H]

Pfam domain/function: PF05681 Fumerase [H]

EC number: =4.2.1.2 [H]

Molecular weight: Translated: 31803; Mature: 31803

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIEDVSNAIIKASTNLSEDKFNALKKAISVEDNENALWALNQILENYKVASKTKFPLC
CCHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
DDTGIPHVIIEIGEKREITGELIAQINEGIERGLNNLPARPMAVKGNDVERIEQSKGLYN
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCC
RPGQMKAASFLIDSFSEDSTYKRNISPDTLNIHFILEGGGPEIRAKTYRVYHKRSIENVI
CCCCHHHHHHHHHCCCCCCCEECCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHH
GTAIGWLSESLKMLGCTPSVPAVGIGRTHYEASSLLLKSIVYGNLDSQSDLENYVTQKLN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
ETNIGPLGFGGKTTVLGSFVNVGNQRASGVRIVSVRPSCFVEPRVATLHL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCEEEECC
>Mature Secondary Structure
MDIIEDVSNAIIKASTNLSEDKFNALKKAISVEDNENALWALNQILENYKVASKTKFPLC
CCHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
DDTGIPHVIIEIGEKREITGELIAQINEGIERGLNNLPARPMAVKGNDVERIEQSKGLYN
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCC
RPGQMKAASFLIDSFSEDSTYKRNISPDTLNIHFILEGGGPEIRAKTYRVYHKRSIENVI
CCCCHHHHHHHHHCCCCCCCEECCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHH
GTAIGWLSESLKMLGCTPSVPAVGIGRTHYEASSLLLKSIVYGNLDSQSDLENYVTQKLN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
ETNIGPLGFGGKTTVLGSFVNVGNQRASGVRIVSVRPSCFVEPRVATLHL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]