Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148642380

Identifier: 148642380

GI number: 148642380

Start: 305983

End: 306678

Strand: Reverse

Name: 148642380

Synonym: Msm_0320

Alternate gene names: NA

Gene position: 306678-305983 (Counterclockwise)

Preceding gene: 148642381

Following gene: 148642379

Centisome position: 16.55

GC content: 34.05

Gene sequence:

>696_bases
ATGGTATTGGTTCCTGAGTTTGTTCCTCAAGCATTTATATCAATGTATTTGCCGGCAATTTATGCAGGTTTGATTATCGG
ATTTATAGGATCAATAGCTATTGCTATGAAAAAAGAAGAAATTCATATACTTATTCTTACAGATTTAATTGGTCTTGCAA
TGATTTTTGTTGTTTCTGCTGTAGGAACTGATTTGGCTGAATCTCTGATTTTACCTGGTTTGGTAGTTGAACTGGCTGAA
ACATTAGCTATTTCAGAGATTTTACTTTCAAGGGAAATGCATATCATTGAACAGAATCCTAAAAGAAGCTTGCCTGAAGG
CACTTCATTATTCCCGATTCCATTTAATTTGGATTTGGAAATTATGACTACAGCACCTAATTTCATTGCTTTGGCTTTAA
TAGCTTATGGTATCTTTTTAACCGGATTTACTGGTGGTGCAGTAGCGGGTGGGGGAATTTTATTATATGCAATTTCTAAA
AAAGCAAGAGGTTTGCCTGTTTTCACTTTAGAAGGACTTGGTGGAGTTTCAGGTATTGCTTGGTGTTTATGGATTATTGG
ATTTGCATTATTCTTTATAATGCCTAAGTTATGGTTATTAAGTTTATTCTTAGCGGCTTGTGGATTGTTATTAAAAGTAG
CTTCAAAAGTTGGTTTAATTGGAGTGCTTATGAGAGAAGATATGAATAAGGAGTAA

Upstream 100 bases:

>100_bases
ATAATGTTAAGAAGGCTATAGGGGATTCAGTAAAAGTAGCTAATGAAGTTAAAATAAATGATGCTAAATCCAGAGCCAGG
CAATTAAGGAGGGATAATTA

Downstream 100 bases:

>100_bases
GTAAATATGGATTTTAGTACACTTGGTGGAAATTTATTGGGTACAGTTCCTTTTGGGGATATTGTATTGTACTTCACACC
TCTTAATTTGTTTTTATTTG

Product: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MVLVPEFVPQAFISMYLPAIYAGLIIGFIGSIAIAMKKEEIHILILTDLIGLAMIFVVSAVGTDLAESLILPGLVVELAE
TLAISEILLSREMHIIEQNPKRSLPEGTSLFPIPFNLDLEIMTTAPNFIALALIAYGIFLTGFTGGAVAGGGILLYAISK
KARGLPVFTLEGLGGVSGIAWCLWIIGFALFFIMPKLWLLSLFLAACGLLLKVASKVGLIGVLMREDMNKE

Sequences:

>Translated_231_residues
MVLVPEFVPQAFISMYLPAIYAGLIIGFIGSIAIAMKKEEIHILILTDLIGLAMIFVVSAVGTDLAESLILPGLVVELAE
TLAISEILLSREMHIIEQNPKRSLPEGTSLFPIPFNLDLEIMTTAPNFIALALIAYGIFLTGFTGGAVAGGGILLYAISK
KARGLPVFTLEGLGGVSGIAWCLWIIGFALFFIMPKLWLLSLFLAACGLLLKVASKVGLIGVLMREDMNKE
>Mature_231_residues
MVLVPEFVPQAFISMYLPAIYAGLIIGFIGSIAIAMKKEEIHILILTDLIGLAMIFVVSAVGTDLAESLILPGLVVELAE
TLAISEILLSREMHIIEQNPKRSLPEGTSLFPIPFNLDLEIMTTAPNFIALALIAYGIFLTGFTGGAVAGGGILLYAISK
KARGLPVFTLEGLGGVSGIAWCLWIIGFALFFIMPKLWLLSLFLAACGLLLKVASKVGLIGVLMREDMNKE

Specific function: Unknown

COG id: COG4036

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019212
- InterPro:   IPR011311 [H]

Pfam domain/function: PF09878 DUF2105 [H]

EC number: NA

Molecular weight: Translated: 24763; Mature: 24763

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLVPEFVPQAFISMYLPAIYAGLIIGFIGSIAIAMKKEEIHILILTDLIGLAMIFVVSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHHHHHHHH
VGTDLAESLILPGLVVELAETLAISEILLSREMHIIEQNPKRSLPEGTSLFPIPFNLDLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEE
IMTTAPNFIALALIAYGIFLTGFTGGAVAGGGILLYAISKKARGLPVFTLEGLGGVSGIA
EEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHHHH
WCLWIIGFALFFIMPKLWLLSLFLAACGLLLKVASKVGLIGVLMREDMNKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVLVPEFVPQAFISMYLPAIYAGLIIGFIGSIAIAMKKEEIHILILTDLIGLAMIFVVSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHHHHHHHH
VGTDLAESLILPGLVVELAETLAISEILLSREMHIIEQNPKRSLPEGTSLFPIPFNLDLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEE
IMTTAPNFIALALIAYGIFLTGFTGGAVAGGGILLYAISKKARGLPVFTLEGLGGVSGIA
EEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHHHH
WCLWIIGFALFFIMPKLWLLSLFLAACGLLLKVASKVGLIGVLMREDMNKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]