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The map label for this gene is 148642379

Identifier: 148642379

GI number: 148642379

Start: 305305

End: 305976

Strand: Reverse

Name: 148642379

Synonym: Msm_0319

Alternate gene names: NA

Gene position: 305976-305305 (Counterclockwise)

Preceding gene: 148642380

Following gene: 148642378

Centisome position: 16.51

GC content: 34.52

Gene sequence:

>672_bases
ATGGATTTTAGTACACTTGGTGGAAATTTATTGGGTACAGTTCCTTTTGGGGATATTGTATTGTACTTCACACCTCTTAA
TTTGTTTTTATTTGCTGTAATGTTAGGGTTTACCTTATTGATAGCTGTAAGTAAACCAGAAACACAAGTCGAAGCTACTT
TCATGAAACTTGGAAATACAGATGTGAAAGTAGGTCCAAAAGAGTTTAAGCAAAGAAGATTTTTATCTGTAATCTGTGGT
ATAGCTTCTGCAGGGGCAATGATTACTGGAGATTTGTTTAACTTTACTTTGTTCATAGCATTAATTGGTATTGTGAATAT
TGGTATTGTTTCAGCTGTAAGGCAGGTTAGTGTTTTAAACTCTGCTTTTAATTATGGTTTAATAGCTATGATGTGTAGTT
TGCCGTTATTTGGTGGAGCAGCTATTGTCCTTGCTTCTTCTGGAACATTGAGTTTGCTGGTGCTAAATCAAATGCATGCA
ACTCCAATGATGATTTTTGGTGCTTTACTGATGCTGCTTGGAATTTTGGGAGAGTGTGGTGTTGCACCATTCTTTGCAAG
TAAGGCAGAAATGTTTAGAACTCCAGGTTCTCCATTTTTGGTTATTATTCATTTAAGTTCATTATTTGTTATTATTAGAG
CAGTGGAGATATTATTATTAGTTTTATGGTAG

Upstream 100 bases:

>100_bases
TTTATTCTTAGCGGCTTGTGGATTGTTATTAAAAGTAGCTTCAAAAGTTGGTTTAATTGGAGTGCTTATGAGAGAAGATA
TGAATAAGGAGTAAGTAAAT

Downstream 100 bases:

>100_bases
TGAGAGTATGGATATTCAAAAAATTATAAGTATTATATTATTGGCAATCTCTACATTGGCTATATTGGCTGCTTTAATAT
TTGATATGGCCAGCTGGGCT

Product: NADH dehydrogenase I, subunit N related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MDFSTLGGNLLGTVPFGDIVLYFTPLNLFLFAVMLGFTLLIAVSKPETQVEATFMKLGNTDVKVGPKEFKQRRFLSVICG
IASAGAMITGDLFNFTLFIALIGIVNIGIVSAVRQVSVLNSAFNYGLIAMMCSLPLFGGAAIVLASSGTLSLLVLNQMHA
TPMMIFGALLMLLGILGECGVAPFFASKAEMFRTPGSPFLVIIHLSSLFVIIRAVEILLLVLW

Sequences:

>Translated_223_residues
MDFSTLGGNLLGTVPFGDIVLYFTPLNLFLFAVMLGFTLLIAVSKPETQVEATFMKLGNTDVKVGPKEFKQRRFLSVICG
IASAGAMITGDLFNFTLFIALIGIVNIGIVSAVRQVSVLNSAFNYGLIAMMCSLPLFGGAAIVLASSGTLSLLVLNQMHA
TPMMIFGALLMLLGILGECGVAPFFASKAEMFRTPGSPFLVIIHLSSLFVIIRAVEILLLVLW
>Mature_223_residues
MDFSTLGGNLLGTVPFGDIVLYFTPLNLFLFAVMLGFTLLIAVSKPETQVEATFMKLGNTDVKVGPKEFKQRRFLSVICG
IASAGAMITGDLFNFTLFIALIGIVNIGIVSAVRQVSVLNSAFNYGLIAMMCSLPLFGGAAIVLASSGTLSLLVLNQMHA
TPMMIFGALLMLLGILGECGVAPFFASKAEMFRTPGSPFLVIIHLSSLFVIIRAVEILLLVLW

Specific function: Unknown

COG id: COG4078

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017059 [H]

Pfam domain/function: PF10125 NADHdeh_related [H]

EC number: NA

Molecular weight: Translated: 23860; Mature: 23860

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSTLGGNLLGTVPFGDIVLYFTPLNLFLFAVMLGFTLLIAVSKPETQVEATFMKLGNT
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
DVKVGPKEFKQRRFLSVICGIASAGAMITGDLFNFTLFIALIGIVNIGIVSAVRQVSVLN
CCEECHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFNYGLIAMMCSLPLFGGAAIVLASSGTLSLLVLNQMHATPMMIFGALLMLLGILGECG
HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHCC
VAPFFASKAEMFRTPGSPFLVIIHLSSLFVIIRAVEILLLVLW
CCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFSTLGGNLLGTVPFGDIVLYFTPLNLFLFAVMLGFTLLIAVSKPETQVEATFMKLGNT
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
DVKVGPKEFKQRRFLSVICGIASAGAMITGDLFNFTLFIALIGIVNIGIVSAVRQVSVLN
CCEECHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFNYGLIAMMCSLPLFGGAAIVLASSGTLSLLVLNQMHATPMMIFGALLMLLGILGECG
HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHCC
VAPFFASKAEMFRTPGSPFLVIIHLSSLFVIIRAVEILLLVLW
CCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]