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The map label for this gene is 148642357

Identifier: 148642357

GI number: 148642357

Start: 287758

End: 288183

Strand: Reverse

Name: 148642357

Synonym: Msm_0297

Alternate gene names: NA

Gene position: 288183-287758 (Counterclockwise)

Preceding gene: 148642358

Following gene: 148642356

Centisome position: 15.55

GC content: 28.87

Gene sequence:

>426_bases
ATGATTCATAATATCAGATTTAGAGAGTTTGTTTATGAGAGTGAAAATCTCGATGAATTAACTCAGGCCATCTACAACAT
ATTTCCAGATGCTGAAATTGAAAGTGAAGATGCAGAAGGATTAATGGAAGATAAAATCATTATACTCTCAGGTGTTGTAG
ATAAGAAAAGACAAACAAAAGCTTTTTTTAATTTACTCTTAGAATTAGACCAAAATCAACTTGATAAATTAAATAATGAT
TTGGAACGCAAAGTTGATGATAAAGGAAATTTATTTTTACGATTATCTAAAGAAGATGCAGTTGACGAAAAAATTACAAT
TGTAGATTCTGGAGATTCAATTCATCTTAAAGTTAAAATAGCAGCATATCCGGCTAAAAAGGAAATCGCTATTAAAAAAG
TTCGTGAAGCTATTGAAAATAACTGA

Upstream 100 bases:

>100_bases
TGCTGGAACTAAAGGACGTGGATTAACTTCCAAAGGAAAAGGTAGTGAACAAGCAAGGAGAAAAAAATAAATCTCCTTTC
TTAATACCTTTTTTGATAAA

Downstream 100 bases:

>100_bases
TTACATTTATATATAACTTATTTTTTATATAATAACCAATCAATTAAGGGAGTGGTTATATGAAAGATGAAGTTTTTTAT
GGAAAAGGAATTCATGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIHNIRFREFVYESENLDELTQAIYNIFPDAEIESEDAEGLMEDKIIILSGVVDKKRQTKAFFNLLLELDQNQLDKLNND
LERKVDDKGNLFLRLSKEDAVDEKITIVDSGDSIHLKVKIAAYPAKKEIAIKKVREAIENN

Sequences:

>Translated_141_residues
MIHNIRFREFVYESENLDELTQAIYNIFPDAEIESEDAEGLMEDKIIILSGVVDKKRQTKAFFNLLLELDQNQLDKLNND
LERKVDDKGNLFLRLSKEDAVDEKITIVDSGDSIHLKVKIAAYPAKKEIAIKKVREAIENN
>Mature_141_residues
MIHNIRFREFVYESENLDELTQAIYNIFPDAEIESEDAEGLMEDKIIILSGVVDKKRQTKAFFNLLLELDQNQLDKLNND
LERKVDDKGNLFLRLSKEDAVDEKITIVDSGDSIHLKVKIAAYPAKKEIAIKKVREAIENN

Specific function: Unknown

COG id: COG1325

COG function: function code J; Predicted exosome subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16265; Mature: 16265

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHNIRFREFVYESENLDELTQAIYNIFPDAEIESEDAEGLMEDKIIILSGVVDKKRQTK
CCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEEEECCCCCHHHHH
AFFNLLLELDQNQLDKLNNDLERKVDDKGNLFLRLSKEDAVDEKITIVDSGDSIHLKVKI
HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEEEEE
AAYPAKKEIAIKKVREAIENN
EECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIHNIRFREFVYESENLDELTQAIYNIFPDAEIESEDAEGLMEDKIIILSGVVDKKRQTK
CCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCEEEEECCCCCHHHHH
AFFNLLLELDQNQLDKLNNDLERKVDDKGNLFLRLSKEDAVDEKITIVDSGDSIHLKVKI
HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEEEEE
AAYPAKKEIAIKKVREAIENN
EECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA