Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642313

Identifier: 148642313

GI number: 148642313

Start: 237141

End: 237434

Strand: Reverse

Name: 148642313

Synonym: Msm_0253

Alternate gene names: NA

Gene position: 237434-237141 (Counterclockwise)

Preceding gene: 148642314

Following gene: 148642312

Centisome position: 12.81

GC content: 27.21

Gene sequence:

>294_bases
ATGGATGAAGAGATACTTTATAAAAAAGCTAAAAACCTTGTTAATAAAAAAGTAAAATTTTACAGATACTTATACTGTTA
TATTATTGTAAATGTATGTTTATTTTTTATTAATCTTTCAGAAATTCACGGAAATTGGACTGATTTACACCAGTGGTGGT
TTTTATGGGTAACTGTTCTTTGGGGAGTCTGGTTAATATTTCATTATATTAAAGTATTTGTTCTTCACGACAGATTTGAC
GATGATTGGATGGAAGAGAAAATTCAAAAAGAAATGGATAAAATGAGGAAATAG

Upstream 100 bases:

>100_bases
AATGCAGTCGGACTTGCTGAAGTAAGTGAGGAAACTATGGATGTAATAAGGGCTGTAGCTAGAAAGAGTTACAATTTAGT
AAATGAATGAGGTTTAAATA

Downstream 100 bases:

>100_bases
GGTAATTATGGCTAATAAAAATGTTGAAGTAATGAGAGGTAATCCTGAAACAGCTGTTAAGAAATTGGCGATTCCAATTA
TGATTTCTATGCTTTTAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MDEEILYKKAKNLVNKKVKFYRYLYCYIIVNVCLFFINLSEIHGNWTDLHQWWFLWVTVLWGVWLIFHYIKVFVLHDRFD
DDWMEEKIQKEMDKMRK

Sequences:

>Translated_97_residues
MDEEILYKKAKNLVNKKVKFYRYLYCYIIVNVCLFFINLSEIHGNWTDLHQWWFLWVTVLWGVWLIFHYIKVFVLHDRFD
DDWMEEKIQKEMDKMRK
>Mature_97_residues
MDEEILYKKAKNLVNKKVKFYRYLYCYIIVNVCLFFINLSEIHGNWTDLHQWWFLWVTVLWGVWLIFHYIKVFVLHDRFD
DDWMEEKIQKEMDKMRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12300; Mature: 12300

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEEILYKKAKNLVNKKVKFYRYLYCYIIVNVCLFFINLSEIHGNWTDLHQWWFLWVTVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WGVWLIFHYIKVFVLHDRFDDDWMEEKIQKEMDKMRK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEEILYKKAKNLVNKKVKFYRYLYCYIIVNVCLFFINLSEIHGNWTDLHQWWFLWVTVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WGVWLIFHYIKVFVLHDRFDDDWMEEKIQKEMDKMRK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA