Click here to switch to the map view.

The map label for this gene is 148642224

Identifier: 148642224

GI number: 148642224

Start: 156000

End: 156968

Strand: Reverse

Name: 148642224

Synonym: Msm_0164

Alternate gene names: NA

Gene position: 156968-156000 (Counterclockwise)

Preceding gene: 148642225

Following gene: 148642223

Centisome position: 8.47

GC content: 25.8

Gene sequence:

>969_bases
ATGTCAAAAAAGAATTATTATATCCTGTCTGAAGGGATTCTTAAAAGGAAAGAAAATACTATTTATTTTGTCAATGAAAA
AGGTAAAAAACCAATCCCAATCAATAAAGTATATTCAATTTATGCATATGGTCAGATAACATTTTCTTCACAGGTAATGA
GTCTTTTATCTAAAAATGGAGTTCCTATTCATTTTTTCAATTATTATGGTTTTTATAGCGGATCTTATTATCCTCGTGAA
ACATTATTGTCTGGTGATTTGTTAGTAAAACAGGCAGATTATTATTTAAATATTCAAAAAAGGTTGGAGTTAGCTAAATT
ATTTGTTGAAGGAGCAGCAAATAATATTTTAAAGGTTTTAGCATATTATAAAATTGAAAACAATATTAAAGAAACATTAT
CAGAGTTAAATTCAACAAATAAAATAACTGAAATAATGAATATTGAAGGTAGGATTCGCTCGGAATATTATTCTAAATTT
GATGAAATTCTTCCCGATGATTTTAAAATGGAAGGCAGATCCAGACAACCTCCTAAAAATATGATAAATTCTTTAATTAG
CTTTGGAAATTCAATGATGTATTCTACAGTTTTGACAGAATTGTATAATACACAATTAAATCCTACAATATCTTATCTTC
ATGAACCTTCTGAAAGAAGATTTTCACTATCTTTGGATCTTAGTGAAATTTTTAAGCCGATTTTTGTTGATAGGTTGATT
TTTTATATGGTTAACAAAAGAATGTTGTCTAAAAAAGATTTTAATGAAGATTTAAACTGTTGTCTTTTAAATGATAAAGG
ACGAAATAAATTCATAAAAGAATACAATAAACGACTTGAAAAAACGATTAAACATAAAAAATTAAAGAAAAATGTTTCTT
ACCAAAGATTAATCCGATTAGAAGCATATAAACTTAAAAAACATATTTTAGGCATTGAAAAATATGATCCATTCGTAAGC
TGGTGGTGA

Upstream 100 bases:

>100_bases
AAAATATTGTTGATAGTTCGATGCCAAAACCTAAAAAGAAAAGAATTTGCAGTAAATGTGCTTATTTTGAGTTTTGTTTT
TCATAGAGGTGTTTTTTAAA

Downstream 100 bases:

>100_bases
CTTTATGTATGTAATTATAGTTTATGATATTAAGGTTGAGCGGGTCAATAAAGTAAAGTCATTTTTAAGGCAGTACCTCT
TTTGGATTCAAAATTCTGTT

Product: putative DNA repair protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSKKNYYILSEGILKRKENTIYFVNEKGKKPIPINKVYSIYAYGQITFSSQVMSLLSKNGVPIHFFNYYGFYSGSYYPRE
TLLSGDLLVKQADYYLNIQKRLELAKLFVEGAANNILKVLAYYKIENNIKETLSELNSTNKITEIMNIEGRIRSEYYSKF
DEILPDDFKMEGRSRQPPKNMINSLISFGNSMMYSTVLTELYNTQLNPTISYLHEPSERRFSLSLDLSEIFKPIFVDRLI
FYMVNKRMLSKKDFNEDLNCCLLNDKGRNKFIKEYNKRLEKTIKHKKLKKNVSYQRLIRLEAYKLKKHILGIEKYDPFVS
WW

Sequences:

>Translated_322_residues
MSKKNYYILSEGILKRKENTIYFVNEKGKKPIPINKVYSIYAYGQITFSSQVMSLLSKNGVPIHFFNYYGFYSGSYYPRE
TLLSGDLLVKQADYYLNIQKRLELAKLFVEGAANNILKVLAYYKIENNIKETLSELNSTNKITEIMNIEGRIRSEYYSKF
DEILPDDFKMEGRSRQPPKNMINSLISFGNSMMYSTVLTELYNTQLNPTISYLHEPSERRFSLSLDLSEIFKPIFVDRLI
FYMVNKRMLSKKDFNEDLNCCLLNDKGRNKFIKEYNKRLEKTIKHKKLKKNVSYQRLIRLEAYKLKKHILGIEKYDPFVS
WW
>Mature_321_residues
SKKNYYILSEGILKRKENTIYFVNEKGKKPIPINKVYSIYAYGQITFSSQVMSLLSKNGVPIHFFNYYGFYSGSYYPRET
LLSGDLLVKQADYYLNIQKRLELAKLFVEGAANNILKVLAYYKIENNIKETLSELNSTNKITEIMNIEGRIRSEYYSKFD
EILPDDFKMEGRSRQPPKNMINSLISFGNSMMYSTVLTELYNTQLNPTISYLHEPSERRFSLSLDLSEIFKPIFVDRLIF
YMVNKRMLSKKDFNEDLNCCLLNDKGRNKFIKEYNKRLEKTIKHKKLKKNVSYQRLIRLEAYKLKKHILGIEKYDPFVSW
W

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 38148; Mature: 38017

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKNYYILSEGILKRKENTIYFVNEKGKKPIPINKVYSIYAYGQITFSSQVMSLLSKNG
CCCCCEEEECCHHHHCCCCEEEEEECCCCCCCCHHHEEEEEEEEEEEHHHHHHHHHHCCC
VPIHFFNYYGFYSGSYYPRETLLSGDLLVKQADYYLNIQKRLELAKLFVEGAANNILKVL
CEEEEEEEECEECCCCCCHHHHHCCCHHEEHHHHHEEHHHHHHHHHHHHHHHHHHHHHHH
AYYKIENNIKETLSELNSTNKITEIMNIEGRIRSEYYSKFDEILPDDFKMEGRSRQPPKN
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
MINSLISFGNSMMYSTVLTELYNTQLNPTISYLHEPSERRFSLSLDLSEIFKPIFVDRLI
HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHH
FYMVNKRMLSKKDFNEDLNCCLLNDKGRNKFIKEYNKRLEKTIKHKKLKKNVSYQRLIRL
HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EAYKLKKHILGIEKYDPFVSWW
HHHHHHHHHCCCHHCCCCCCCC
>Mature Secondary Structure 
SKKNYYILSEGILKRKENTIYFVNEKGKKPIPINKVYSIYAYGQITFSSQVMSLLSKNG
CCCCEEEECCHHHHCCCCEEEEEECCCCCCCCHHHEEEEEEEEEEEHHHHHHHHHHCCC
VPIHFFNYYGFYSGSYYPRETLLSGDLLVKQADYYLNIQKRLELAKLFVEGAANNILKVL
CEEEEEEEECEECCCCCCHHHHHCCCHHEEHHHHHEEHHHHHHHHHHHHHHHHHHHHHHH
AYYKIENNIKETLSELNSTNKITEIMNIEGRIRSEYYSKFDEILPDDFKMEGRSRQPPKN
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
MINSLISFGNSMMYSTVLTELYNTQLNPTISYLHEPSERRFSLSLDLSEIFKPIFVDRLI
HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHH
FYMVNKRMLSKKDFNEDLNCCLLNDKGRNKFIKEYNKRLEKTIKHKKLKKNVSYQRLIRL
HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EAYKLKKHILGIEKYDPFVSWW
HHHHHHHHHCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]