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The map label for this gene is 148642225

Identifier: 148642225

GI number: 148642225

Start: 156983

End: 157489

Strand: Reverse

Name: 148642225

Synonym: Msm_0165

Alternate gene names: NA

Gene position: 157489-156983 (Counterclockwise)

Preceding gene: 148642226

Following gene: 148642224

Centisome position: 8.5

GC content: 21.89

Gene sequence:

>507_bases
ATGAATTTTATGATTTCTAAAATTAATGGAACTCAAATTAATTACTATTTCATATGTAAAACTAAACTATGGTTATTTTC
TCATAATATCCAATTAGAAGATGAGCATGAGAATGTCAAGTTAGGTAAATTTTTACATGAAACTAGTTTTAAAAGAGAAA
AAGATTTTCTTATTGATAACTTAATTAATGTAGATTTTATTAAAATAACTGATTCTGTTGAAATTCATGAAGTAAAAAAG
TCACAAAAAATGAATTTAGCTAATGAATATCAACTTTTATATTATATGTTTTATTTAAAACATGAAAAAGATATAAAAAA
TGTTGTAGGTTTTTTAAATTATCCAGATAGTCGCAAAAAGAAGAAAATTACTTTAACAAAAGAAAAAGAGCGAGATTTAT
TTGAAATAATTGACAATATCAAAAATATTGTTGATAGTTCGATGCCAAAACCTAAAAAGAAAAGAATTTGCAGTAAATGT
GCTTATTTTGAGTTTTGTTTTTCATAG

Upstream 100 bases:

>100_bases
TGTTGAATTTGATTGTAATAGCAATACTTACTTTATCGATGTAAAATATGATTCGGAATTGGGATTAAAACTTTCGGATG
AAGAATCCACAATTTTATAA

Downstream 100 bases:

>100_bases
AGGTGTTTTTTAAAATGTCAAAAAAGAATTATTATATCCTGTCTGAAGGGATTCTTAAAAGGAAAGAAAATACTATTTAT
TTTGTCAATGAAAAAGGTAA

Product: exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MNFMISKINGTQINYYFICKTKLWLFSHNIQLEDEHENVKLGKFLHETSFKREKDFLIDNLINVDFIKITDSVEIHEVKK
SQKMNLANEYQLLYYMFYLKHEKDIKNVVGFLNYPDSRKKKKITLTKEKERDLFEIIDNIKNIVDSSMPKPKKKRICSKC
AYFEFCFS

Sequences:

>Translated_168_residues
MNFMISKINGTQINYYFICKTKLWLFSHNIQLEDEHENVKLGKFLHETSFKREKDFLIDNLINVDFIKITDSVEIHEVKK
SQKMNLANEYQLLYYMFYLKHEKDIKNVVGFLNYPDSRKKKKITLTKEKERDLFEIIDNIKNIVDSSMPKPKKKRICSKC
AYFEFCFS
>Mature_168_residues
MNFMISKINGTQINYYFICKTKLWLFSHNIQLEDEHENVKLGKFLHETSFKREKDFLIDNLINVDFIKITDSVEIHEVKK
SQKMNLANEYQLLYYMFYLKHEKDIKNVVGFLNYPDSRKKKKITLTKEKERDLFEIIDNIKNIVDSSMPKPKKKRICSKC
AYFEFCFS

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013343
- InterPro:   IPR022765 [H]

Pfam domain/function: PF01930 DUF83 [H]

EC number: NA

Molecular weight: Translated: 20244; Mature: 20244

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFMISKINGTQINYYFICKTKLWLFSHNIQLEDEHENVKLGKFLHETSFKREKDFLIDN
CCEEEEECCCCEEEEEEEEEEEEEEEECCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHH
LINVDFIKITDSVEIHEVKKSQKMNLANEYQLLYYMFYLKHEKDIKNVVGFLNYPDSRKK
HCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
KKITLTKEKERDLFEIIDNIKNIVDSSMPKPKKKRICSKCAYFEFCFS
EEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFMISKINGTQINYYFICKTKLWLFSHNIQLEDEHENVKLGKFLHETSFKREKDFLIDN
CCEEEEECCCCEEEEEEEEEEEEEEEECCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHH
LINVDFIKITDSVEIHEVKKSQKMNLANEYQLLYYMFYLKHEKDIKNVVGFLNYPDSRKK
HCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
KKITLTKEKERDLFEIIDNIKNIVDSSMPKPKKKRICSKCAYFEFCFS
EEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]