Click here to switch to the map view.

The map label for this gene is gatC

Identifier: 148642216

GI number: 148642216

Start: 149113

End: 149328

Strand: Reverse

Name: gatC

Synonym: Msm_0156

Alternate gene names: NA

Gene position: 149328-149113 (Counterclockwise)

Preceding gene: 148642217

Following gene: 148642215

Centisome position: 8.06

GC content: 27.31

Gene sequence:

>216_bases
ATGAAAATTGAAAAAGATGCAGAAAATATTTTAAACAAGTTTTCAAAAACTTTAGAGAATATTCCAGATCTTGAAGAAAC
TTGGTATATTACTGACAATTTAAATCTTACTCGTGAAGATAAATCTCATGAGAAACATCCTGAAAAAATTTTAAGGAATG
CTCATATTGATAAAGAAGGCAAACTTGTTGTTAAAAGAGCAGATTGGGTTAATTAG

Upstream 100 bases:

>100_bases
ATTTTAAGTTGGCAAAAAGCCCAAGTTTTAATAAACATTTATTAATATTAAAAAACAAAATTATTTTTATTATTATCAAA
TAATCATAGGAGATTTATTT

Downstream 100 bases:

>100_bases
GGGAATTTTTTATGAAAATGGATTTGGTTTTAGAACTTATGGATGTTCCTGGACAGCTTGTTTCTGTTTTGGATCCGATT
AGTGGCCTTGGTGCAAACCT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp-TRNA(Asn)/Glu-TRNA(Gln) Amidotransferase Subunit C GatC; Asp/Glu Amidotransferase Subunit C

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MKIEKDAENILNKFSKTLENIPDLEETWYITDNLNLTREDKSHEKHPEKILRNAHIDKEGKLVVKRADWVN

Sequences:

>Translated_71_residues
MKIEKDAENILNKFSKTLENIPDLEETWYITDNLNLTREDKSHEKHPEKILRNAHIDKEGKLVVKRADWVN
>Mature_71_residues
MKIEKDAENILNKFSKTLENIPDLEETWYITDNLNLTREDKSHEKHPEKILRNAHIDKEGKLVVKRADWVN

Specific function: Unknown

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 6.3.5.-

Molecular weight: Translated: 8457; Mature: 8457

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEKDAENILNKFSKTLENIPDLEETWYITDNLNLTREDKSHEKHPEKILRNAHIDKEG
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
KLVVKRADWVN
CEEEECCCCCC
>Mature Secondary Structure
MKIEKDAENILNKFSKTLENIPDLEETWYITDNLNLTREDKSHEKHPEKILRNAHIDKEG
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
KLVVKRADWVN
CEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA