| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642215
Identifier: 148642215
GI number: 148642215
Start: 148616
End: 149101
Strand: Reverse
Name: 148642215
Synonym: Msm_0155
Alternate gene names: NA
Gene position: 149101-148616 (Counterclockwise)
Preceding gene: 148642216
Following gene: 148642214
Centisome position: 8.05
GC content: 33.54
Gene sequence:
>486_bases ATGAAAATGGATTTGGTTTTAGAACTTATGGATGTTCCTGGACAGCTTGTTTCTGTTTTGGATCCGATTAGTGGCCTTGG TGCAAACCTGGTTACTGTAATCCATAAAAGAGATTCTAAAAATGAAAAAGGAATGATTCCGGTTCAGCTTACTCTTGAAG GTGAACGTGATAGCCTTGATAGGGTTATTGAAAGGTTCAAAGAGTTGGGAGTTTCAATTATTGCAATGGATGGAGTCGTT AAAAAGGAAGTTGTGAGCACTATTTTAATTGGCCATATTGTTGATAATGACATTAGAGACACTATGGATAAAATTAATTC TTTAGACGGTGTTTATGTAGTTGGATTTGATATTAAATTAGACGGGGAATCCAAATCCTCTGCCTTAATTAATATTGAAA CAGACTTTGGCATGAAAGAATTTATATTTGATAAGATTGGTAAAATAGCTGCAGAAAAAGATTTACTTATGATTAATGAA GTTTAG
Upstream 100 bases:
>100_bases ATGAGAAACATCCTGAAAAAATTTTAAGGAATGCTCATATTGATAAAGAAGGCAAACTTGTTGTTAAAAGAGCAGATTGG GTTAATTAGGGGAATTTTTT
Downstream 100 bases:
>100_bases GGATAGTATGAAAGAATGTAAAGTCATAGTAATGGGATTTGGTGCAGTTGGTCAGGGTGTGGCTAGGGCAATCTCATTAA AAAAAGACATGATTAAAGAA
Product: allosteric regulator of homoserine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKMDLVLELMDVPGQLVSVLDPISGLGANLVTVIHKRDSKNEKGMIPVQLTLEGERDSLDRVIERFKELGVSIIAMDGVV KKEVVSTILIGHIVDNDIRDTMDKINSLDGVYVVGFDIKLDGESKSSALINIETDFGMKEFIFDKIGKIAAEKDLLMINE V
Sequences:
>Translated_161_residues MKMDLVLELMDVPGQLVSVLDPISGLGANLVTVIHKRDSKNEKGMIPVQLTLEGERDSLDRVIERFKELGVSIIAMDGVV KKEVVSTILIGHIVDNDIRDTMDKINSLDGVYVVGFDIKLDGESKSSALINIETDFGMKEFIFDKIGKIAAEKDLLMINE V >Mature_161_residues MKMDLVLELMDVPGQLVSVLDPISGLGANLVTVIHKRDSKNEKGMIPVQLTLEGERDSLDRVIERFKELGVSIIAMDGVV KKEVVSTILIGHIVDNDIRDTMDKINSLDGVYVVGFDIKLDGESKSSALINIETDFGMKEFIFDKIGKIAAEKDLLMINE V
Specific function: Unknown
COG id: COG2061
COG function: function code E; ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT [H]
EC number: NA
Molecular weight: Translated: 17773; Mature: 17773
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMDLVLELMDVPGQLVSVLDPISGLGANLVTVIHKRDSKNEKGMIPVQLTLEGERDSLD CCHHHHHHHHHCCHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCEEEEEEEECCCCCHHH RVIERFKELGVSIIAMDGVVKKEVVSTILIGHIVDNDIRDTMDKINSLDGVYVVGFDIKL HHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEEEE DGESKSSALINIETDFGMKEFIFDKIGKIAAEKDLLMINEV CCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MKMDLVLELMDVPGQLVSVLDPISGLGANLVTVIHKRDSKNEKGMIPVQLTLEGERDSLD CCHHHHHHHHHCCHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCEEEEEEEECCCCCHHH RVIERFKELGVSIIAMDGVVKKEVVSTILIGHIVDNDIRDTMDKINSLDGVYVVGFDIKL HHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEEEE DGESKSSALINIETDFGMKEFIFDKIGKIAAEKDLLMINEV CCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]