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The map label for this gene is hdrC2 [H]

Identifier: 148642144

GI number: 148642144

Start: 83164

End: 83772

Strand: Reverse

Name: hdrC2 [H]

Synonym: Msm_0084

Alternate gene names: 148642144

Gene position: 83772-83164 (Counterclockwise)

Preceding gene: 148642145

Following gene: 148642143

Centisome position: 4.52

GC content: 36.62

Gene sequence:

>609_bases
ATGCATACTCAGAAAATCAGTGAAACACCTCTTGATTTTGCCGAGGCTATAAAAGAAGATATTAAAAGTTCAAAATATGA
TGGTGTCTTAAAATGTGTTCAGTGCGGAATGTGTACTTCAACATGTCCTGCAGCACGTCATTCCAATTATAATCCTCGTG
AAATAATGGAGAGGGTCTTTGAAGGAGATGAAACACTCCTTGAAGATGAAGACTTATGGAACTGTTTTTATTGCTATACA
TGTCATAGTACATGTCCTGTTGGAAACAGTGTTTGTGAAGTTAATCAGATTATTAAACAGTTCGCCATATCAAAAGGAAT
TGCATATGAGCAGCTATATGATTATTTAGGCTTTGCAGATAGCTACTTTAATGCAGCTATCGGTGCAATCCCATCTAATT
TTTATGAGGAAATTAGTGAAGATGTAGACGGATGGTGGGAATTTAGACAGCACTTGAGTGAAATCAGGGAAGAATTGGGT
TTAGGTCCGGTTTCACCTCCTCAGGAAGTTATTGATGAAGTCTCTTTAATTTTAACCAATACTGGTTTTAAAGACAGAAT
GGATAAAATAAGACAGTCAAAGGAGGGTAATGATGAAGCAAGTTCCTGA

Upstream 100 bases:

>100_bases
TATGCAGGCAGTCCGATGCCTTAAGAGCTAATAAATTATCTTTAAAATTAAAGAAAATGATTAAAAATCATGAATTTAAA
TTATAATTGAGGTTATTGAT

Downstream 100 bases:

>100_bases
TGAAAATATTCTTTTGTTTAAAAGTTGTCTTGTAAGTGTGGAATATCCGGGTATTGAATCATCCACTAAGTTTGTTTTTG
ATAAAATTGGTATTGATTAT

Product: heterodisulfide reductase, subunit C, HdrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MHTQKISETPLDFAEAIKEDIKSSKYDGVLKCVQCGMCTSTCPAARHSNYNPREIMERVFEGDETLLEDEDLWNCFYCYT
CHSTCPVGNSVCEVNQIIKQFAISKGIAYEQLYDYLGFADSYFNAAIGAIPSNFYEEISEDVDGWWEFRQHLSEIREELG
LGPVSPPQEVIDEVSLILTNTGFKDRMDKIRQSKEGNDEASS

Sequences:

>Translated_202_residues
MHTQKISETPLDFAEAIKEDIKSSKYDGVLKCVQCGMCTSTCPAARHSNYNPREIMERVFEGDETLLEDEDLWNCFYCYT
CHSTCPVGNSVCEVNQIIKQFAISKGIAYEQLYDYLGFADSYFNAAIGAIPSNFYEEISEDVDGWWEFRQHLSEIREELG
LGPVSPPQEVIDEVSLILTNTGFKDRMDKIRQSKEGNDEASS
>Mature_202_residues
MHTQKISETPLDFAEAIKEDIKSSKYDGVLKCVQCGMCTSTCPAARHSNYNPREIMERVFEGDETLLEDEDLWNCFYCYT
CHSTCPVGNSVCEVNQIIKQFAISKGIAYEQLYDYLGFADSYFNAAIGAIPSNFYEEISEDVDGWWEFRQHLSEIREELG
LGPVSPPQEVIDEVSLILTNTGFKDRMDKIRQSKEGNDEASS

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B) [H]

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 22931; Mature: 22931

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTQKISETPLDFAEAIKEDIKSSKYDGVLKCVQCGMCTSTCPAARHSNYNPREIMERVF
CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHH
EGDETLLEDEDLWNCFYCYTCHSTCPVGNSVCEVNQIIKQFAISKGIAYEQLYDYLGFAD
CCCHHHHCCCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SYFNAAIGAIPSNFYEEISEDVDGWWEFRQHLSEIREELGLGPVSPPQEVIDEVSLILTN
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
TGFKDRMDKIRQSKEGNDEASS
CCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHTQKISETPLDFAEAIKEDIKSSKYDGVLKCVQCGMCTSTCPAARHSNYNPREIMERVF
CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHH
EGDETLLEDEDLWNCFYCYTCHSTCPVGNSVCEVNQIIKQFAISKGIAYEQLYDYLGFAD
CCCHHHHCCCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SYFNAAIGAIPSNFYEEISEDVDGWWEFRQHLSEIREELGLGPVSPPQEVIDEVSLILTN
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
TGFKDRMDKIRQSKEGNDEASS
CCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]