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The map label for this gene is 148642145

Identifier: 148642145

GI number: 148642145

Start: 83787

End: 85034

Strand: Reverse

Name: 148642145

Synonym: Msm_0085

Alternate gene names: NA

Gene position: 85034-83787 (Counterclockwise)

Preceding gene: 148642146

Following gene: 148642144

Centisome position: 4.59

GC content: 33.41

Gene sequence:

>1248_bases
TTGAAAGAGAGAACAATTGGCCAAATTAATAAGAAGATTGAAAATAATGAAGCCAAAATATATACAGCAGAAGAGTTTAA
AAAGCTTATAAAAGAAGACAATGCTCCAAGCTTTGAAGAAGTGGATGTAGTAACTGCAGGAACCTGTGGAGTTATGAGCG
GTACTGCAGCTATCTTTAACTTTACAGTATCAGAGCCAGGAGTGTTTATGAGGGCAAAAAATATATATTTAAATGGTGTT
CCAGCTAATATTGGCCCATGTCCTAATGAATGGTTGGGTTCTGTAGATTTAATTCTTCATGGAACCTCTAAATCAGTAGA
AGACTCATCATATGGTGGAGGATTCCTATTAAAAGACATTCTTGAAGGAAAAGATATTGACGTTAAAGTTGAAGCAATCA
ATGGAGACATTATTGAATCAACAACAAACATTGGCGAAATTACAAGAGCACAAATGATTGGAACACGTATGGCATTTAAA
AATTATACAGCATTTGTAAATCCATCTGCAGAACAGGTTTCATCAATATTTTCAGCTATTCCTCTGGAAGGAAACTTAAA
AGGTCTGACATTTTCAGGATGTGGGGATTTAAACCCTCTTCAAAATGATCCGAATAATTTAATAATTGGAAACGGAACTA
AAGTTTTATTAAACGGTGCTGAAGCTATTGTTTTAGGGGAAGGAACAAGAAGTTCACCTGAAAAACCAAATTTAATGGTT
TCAGGAAATCTTAAAGATATGGAAGCAAATTATGTTGGCGGATTTAAAACCGGTGAAGGCGGAGAAGTCTACGATACATT
GGCTATTCCAATTCCTGTTTTAAATGAAGAAATATATAATAATTTATTAATTAAAAATAGTGACATTCCATTAACTGTAG
CTGATATTAAAGGCCGTCATTTGCCACTGACACAAACTGATTATGGTGCAATGTGGGATAATCATGAATTAAGGCCAAAA
TATGTTTCAGATAACTGCGGCTGTGATAGTTGTACAGTTGAGGATGTATGTCCAACAAATGCATTTAAAAATAAAAGACT
GGATTTATCTAAATGTTTTGGTTGCGGAATGTGTGTGCATTACTGTAAAAACAATAGCTTTACAATGGATGCAGGCAATG
TTGACCTGGAAATAGGCGGTAAAAAACATAATATTCCAATTATATGCAGGCAGTCCGATGCCTTAAGAGCTAATAAATTA
TCTTTAAAATTAAAGAAAATGATTAAAAATCATGAATTTAAATTATAA

Upstream 100 bases:

>100_bases
CTGACGATATCACTTCCCTTGAAACCTTAAGAAGAGGTTTAAGGGGAGATACTGTAGGAAAAATTTAAACCGTAAGAAAG
TTTAAAAGAAGGTATTTAAT

Downstream 100 bases:

>100_bases
TTGAGGTTATTGATATGCATACTCAGAAAATCAGTGAAACACCTCTTGATTTTGCCGAGGCTATAAAAGAAGATATTAAA
AGTTCAAAATATGATGGTGT

Product: putative ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKERTIGQINKKIENNEAKIYTAEEFKKLIKEDNAPSFEEVDVVTAGTCGVMSGTAAIFNFTVSEPGVFMRAKNIYLNGV
PANIGPCPNEWLGSVDLILHGTSKSVEDSSYGGGFLLKDILEGKDIDVKVEAINGDIIESTTNIGEITRAQMIGTRMAFK
NYTAFVNPSAEQVSSIFSAIPLEGNLKGLTFSGCGDLNPLQNDPNNLIIGNGTKVLLNGAEAIVLGEGTRSSPEKPNLMV
SGNLKDMEANYVGGFKTGEGGEVYDTLAIPIPVLNEEIYNNLLIKNSDIPLTVADIKGRHLPLTQTDYGAMWDNHELRPK
YVSDNCGCDSCTVEDVCPTNAFKNKRLDLSKCFGCGMCVHYCKNNSFTMDAGNVDLEIGGKKHNIPIICRQSDALRANKL
SLKLKKMIKNHEFKL

Sequences:

>Translated_415_residues
MKERTIGQINKKIENNEAKIYTAEEFKKLIKEDNAPSFEEVDVVTAGTCGVMSGTAAIFNFTVSEPGVFMRAKNIYLNGV
PANIGPCPNEWLGSVDLILHGTSKSVEDSSYGGGFLLKDILEGKDIDVKVEAINGDIIESTTNIGEITRAQMIGTRMAFK
NYTAFVNPSAEQVSSIFSAIPLEGNLKGLTFSGCGDLNPLQNDPNNLIIGNGTKVLLNGAEAIVLGEGTRSSPEKPNLMV
SGNLKDMEANYVGGFKTGEGGEVYDTLAIPIPVLNEEIYNNLLIKNSDIPLTVADIKGRHLPLTQTDYGAMWDNHELRPK
YVSDNCGCDSCTVEDVCPTNAFKNKRLDLSKCFGCGMCVHYCKNNSFTMDAGNVDLEIGGKKHNIPIICRQSDALRANKL
SLKLKKMIKNHEFKL
>Mature_415_residues
MKERTIGQINKKIENNEAKIYTAEEFKKLIKEDNAPSFEEVDVVTAGTCGVMSGTAAIFNFTVSEPGVFMRAKNIYLNGV
PANIGPCPNEWLGSVDLILHGTSKSVEDSSYGGGFLLKDILEGKDIDVKVEAINGDIIESTTNIGEITRAQMIGTRMAFK
NYTAFVNPSAEQVSSIFSAIPLEGNLKGLTFSGCGDLNPLQNDPNNLIIGNGTKVLLNGAEAIVLGEGTRSSPEKPNLMV
SGNLKDMEANYVGGFKTGEGGEVYDTLAIPIPVLNEEIYNNLLIKNSDIPLTVADIKGRHLPLTQTDYGAMWDNHELRPK
YVSDNCGCDSCTVEDVCPTNAFKNKRLDLSKCFGCGMCVHYCKNNSFTMDAGNVDLEIGGKKHNIPIICRQSDALRANKL
SLKLKKMIKNHEFKL

Specific function: Unknown

COG id: COG1900

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR002708
- InterPro:   IPR017677
- ProDom:   PD011569 [H]

Pfam domain/function: PF01837 DUF39 [H]

EC number: NA

Molecular weight: Translated: 45175; Mature: 45175

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKERTIGQINKKIENNEAKIYTAEEFKKLIKEDNAPSFEEVDVVTAGTCGVMSGTAAIFN
CCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCCEEEEE
FTVSEPGVFMRAKNIYLNGVPANIGPCPNEWLGSVDLILHGTSKSVEDSSYGGGFLLKDI
EEECCCCEEEEEEEEEEECCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHH
LEGKDIDVKVEAINGDIIESTTNIGEITRAQMIGTRMAFKNYTAFVNPSAEQVSSIFSAI
HCCCCCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHC
PLEGNLKGLTFSGCGDLNPLQNDPNNLIIGNGTKVLLNGAEAIVLGEGTRSSPEKPNLMV
CCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCEEEECCCCCCCCCCCCEEE
SGNLKDMEANYVGGFKTGEGGEVYDTLAIPIPVLNEEIYNNLLIKNSDIPLTVADIKGRH
ECCCCCCCCCCCCCEECCCCCCEEEEEECCCHHHCHHHHCCEEEECCCCCEEEECCCCCC
LPLTQTDYGAMWDNHELRPKYVSDNCGCDSCTVEDVCPTNAFKNKRLDLSKCFGCGMCVH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHH
YCKNNSFTMDAGNVDLEIGGKKHNIPIICRQSDALRANKLSLKLKKMIKNHEFKL
HHCCCCEEEECCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKERTIGQINKKIENNEAKIYTAEEFKKLIKEDNAPSFEEVDVVTAGTCGVMSGTAAIFN
CCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCCEEEEE
FTVSEPGVFMRAKNIYLNGVPANIGPCPNEWLGSVDLILHGTSKSVEDSSYGGGFLLKDI
EEECCCCEEEEEEEEEEECCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHH
LEGKDIDVKVEAINGDIIESTTNIGEITRAQMIGTRMAFKNYTAFVNPSAEQVSSIFSAI
HCCCCCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHC
PLEGNLKGLTFSGCGDLNPLQNDPNNLIIGNGTKVLLNGAEAIVLGEGTRSSPEKPNLMV
CCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCEEEECCCCCCCCCCCCEEE
SGNLKDMEANYVGGFKTGEGGEVYDTLAIPIPVLNEEIYNNLLIKNSDIPLTVADIKGRH
ECCCCCCCCCCCCCEECCCCCCEEEEEECCCHHHCHHHHCCEEEECCCCCEEEECCCCCC
LPLTQTDYGAMWDNHELRPKYVSDNCGCDSCTVEDVCPTNAFKNKRLDLSKCFGCGMCVH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHH
YCKNNSFTMDAGNVDLEIGGKKHNIPIICRQSDALRANKLSLKLKKMIKNHEFKL
HHCCCCEEEECCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]