| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642130
Identifier: 148642130
GI number: 148642130
Start: 67615
End: 69192
Strand: Reverse
Name: 148642130
Synonym: Msm_0070
Alternate gene names: NA
Gene position: 69192-67615 (Counterclockwise)
Preceding gene: 148642131
Following gene: 148642129
Centisome position: 3.73
GC content: 29.02
Gene sequence:
>1578_bases ATGGAAGAATCTGCTCTAGTTGCAAAGGCTGAAAAATATCTCAAAGAGATTTCAAATGACAGTATTAGATTGGATAATAT TGAAGAGTTTGAAAATTTCAAAAGATTATACTATAAACTAGATGACAGATTAAACAGTTTACAGGAATTAAAAGAGAGTA TGGATGCACAGGGATACACCACTCCTTTTACATCCTTAAATAAATATGGTACAAAAGCAATAGCTGAAGTTTCACTTGAG GAAATGAGTGAAAACAGTAGACATAATCAGATGTTTAGAATGAAAGCTAATGCTAAAAAAAATGTTCTGGACAGAGTAAA ATCAGCTATTGATGCTCATAAAATTGCAATTGGACATTTGGAACAATGCGGTTATCTTAAATGTGATTCATGTTATAAAA AATATTCCCTCAGCGAGTTCAGACTTAAAGGTGAAAAATGCAGCTGCGGTCATGAAAACTTCTCTTTTAAAATAAATAAG GATGCAACCTACAGATTGGAAATTATTCCATATTTGCCTTTGTCCGGCAATTATTTGGTGTTGATGAGTGAATTGTCAGG TTATGGAAGAAATTCATTTAAAAAAGTATTAAATATTCTTAAACAAGAACGTAAAGGTCTTGTAAAAACTATTTCTTTAG TTATCCGTTTTAGAGATGAAAATGGACGTTGGATTCGTAAGAATGTAACTCTGGATTCAGAATATATCAGTAATTATGAG GAAGAGGTTAGAAACAGATACGGAAAAGATGTCAGAATTGAAGTTTTAAGATTCCACAGAACCAAACCTGCTATTATTGA TGATAAATATGTCAGAAATGCACTGGCTATCAGTTATGTTAAATATAGTGAAGACATTATTTCCAGCATTAAAGATTCTA TTTTAAAAAGGAAACTGTCTGATTTTAAAAGAATTAATAAATATGATGCTATCAGATATAAATATGAAAATGAAATTCCA GGATTTATCGAAGAATATGATATTGGAGAGTTAGAATCCTGGAGACAGTCAAAGATTACAGAAGAATTTGAAAAGCTTCA TTTCATTGATAAATTCGGTAATTACAACCGTTCTTTAAAAAGAGATTTAAAAATAAGGGAAAATATTGAAAAAACCATAT TTGAAAATATGGCTCCTACTTTAATGATGTGGGATATTTTCAGATATTACTTAACAACATCACACAATAACCGTAAGATT AGCAATGGTCCATTTCCATATATTAGAGCAGAACTTGATCGTCAACAACGTAAAGTGTTCCAGACTACTTTTAAAAAGGT TATCAAGGTTTTAAATGAGTTTACAGACTTAAAAATAATTTCAATTCCAGATATGGATCTTATTTTATATGAAAAATTCA AGTTTGAAAAACAGTCCAAAAACTCAAATATTTTATTTAACTATCCTGCTTTAGGTGCTGGTTTAATACATGAACATGGT AATATAGAAATAGAAACTATTGGAAATGTATTAAATATTAATGATTCTAAAATTAAAAAGGAACTTAAAAATATTAATCA TATCAGAAAACCGAAAAGTGCAAAATCCAAGAAATTTTTAGATTTAATTAAGAAGTGA
Upstream 100 bases:
>100_bases AATGATTCTTGCAACTGGAGAAAGTGCAGCATTATTATCTCCAGACGAATGTGAAGTCGGTGAAAGAATACAATAATCTT AATTTAATTCAGTGATTTTA
Downstream 100 bases:
>100_bases TGTTTATGGATGAGGATGTTACTTCTGTACATATAACAAAAGGATTAACTTCTTCAACTATTTTGGATTTAATTGAAGAA TATCCCAATCTGGAAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MEESALVAKAEKYLKEISNDSIRLDNIEEFENFKRLYYKLDDRLNSLQELKESMDAQGYTTPFTSLNKYGTKAIAEVSLE EMSENSRHNQMFRMKANAKKNVLDRVKSAIDAHKIAIGHLEQCGYLKCDSCYKKYSLSEFRLKGEKCSCGHENFSFKINK DATYRLEIIPYLPLSGNYLVLMSELSGYGRNSFKKVLNILKQERKGLVKTISLVIRFRDENGRWIRKNVTLDSEYISNYE EEVRNRYGKDVRIEVLRFHRTKPAIIDDKYVRNALAISYVKYSEDIISSIKDSILKRKLSDFKRINKYDAIRYKYENEIP GFIEEYDIGELESWRQSKITEEFEKLHFIDKFGNYNRSLKRDLKIRENIEKTIFENMAPTLMMWDIFRYYLTTSHNNRKI SNGPFPYIRAELDRQQRKVFQTTFKKVIKVLNEFTDLKIISIPDMDLILYEKFKFEKQSKNSNILFNYPALGAGLIHEHG NIEIETIGNVLNINDSKIKKELKNINHIRKPKSAKSKKFLDLIKK
Sequences:
>Translated_525_residues MEESALVAKAEKYLKEISNDSIRLDNIEEFENFKRLYYKLDDRLNSLQELKESMDAQGYTTPFTSLNKYGTKAIAEVSLE EMSENSRHNQMFRMKANAKKNVLDRVKSAIDAHKIAIGHLEQCGYLKCDSCYKKYSLSEFRLKGEKCSCGHENFSFKINK DATYRLEIIPYLPLSGNYLVLMSELSGYGRNSFKKVLNILKQERKGLVKTISLVIRFRDENGRWIRKNVTLDSEYISNYE EEVRNRYGKDVRIEVLRFHRTKPAIIDDKYVRNALAISYVKYSEDIISSIKDSILKRKLSDFKRINKYDAIRYKYENEIP GFIEEYDIGELESWRQSKITEEFEKLHFIDKFGNYNRSLKRDLKIRENIEKTIFENMAPTLMMWDIFRYYLTTSHNNRKI SNGPFPYIRAELDRQQRKVFQTTFKKVIKVLNEFTDLKIISIPDMDLILYEKFKFEKQSKNSNILFNYPALGAGLIHEHG NIEIETIGNVLNINDSKIKKELKNINHIRKPKSAKSKKFLDLIKK >Mature_525_residues MEESALVAKAEKYLKEISNDSIRLDNIEEFENFKRLYYKLDDRLNSLQELKESMDAQGYTTPFTSLNKYGTKAIAEVSLE EMSENSRHNQMFRMKANAKKNVLDRVKSAIDAHKIAIGHLEQCGYLKCDSCYKKYSLSEFRLKGEKCSCGHENFSFKINK DATYRLEIIPYLPLSGNYLVLMSELSGYGRNSFKKVLNILKQERKGLVKTISLVIRFRDENGRWIRKNVTLDSEYISNYE EEVRNRYGKDVRIEVLRFHRTKPAIIDDKYVRNALAISYVKYSEDIISSIKDSILKRKLSDFKRINKYDAIRYKYENEIP GFIEEYDIGELESWRQSKITEEFEKLHFIDKFGNYNRSLKRDLKIRENIEKTIFENMAPTLMMWDIFRYYLTTSHNNRKI SNGPFPYIRAELDRQQRKVFQTTFKKVIKVLNEFTDLKIISIPDMDLILYEKFKFEKQSKNSNILFNYPALGAGLIHEHG NIEIETIGNVLNINDSKIKKELKNINHIRKPKSAKSKKFLDLIKK
Specific function: Unknown
COG id: COG1771
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007503 [H]
Pfam domain/function: PF04409 DUF530 [H]
EC number: NA
Molecular weight: Translated: 61966; Mature: 61966
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEESALVAKAEKYLKEISNDSIRLDNIEEFENFKRLYYKLDDRLNSLQELKESMDAQGYT CCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TPFTSLNKYGTKAIAEVSLEEMSENSRHNQMFRMKANAKKNVLDRVKSAIDAHKIAIGHL CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHH EQCGYLKCDSCYKKYSLSEFRLKGEKCSCGHENFSFKINKDATYRLEIIPYLPLSGNYLV HHCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCEEE LMSELSGYGRNSFKKVLNILKQERKGLVKTISLVIRFRDENGRWIRKNVTLDSEYISNYE EEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCHHHHHHHH EEVRNRYGKDVRIEVLRFHRTKPAIIDDKYVRNALAISYVKYSEDIISSIKDSILKRKLS HHHHHHCCCCEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFKRINKYDAIRYKYENEIPGFIEEYDIGELESWRQSKITEEFEKLHFIDKFGNYNRSLK HHHHHCHHHHEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RDLKIRENIEKTIFENMAPTLMMWDIFRYYLTTSHNNRKISNGPFPYIRAELDRQQRKVF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH QTTFKKVIKVLNEFTDLKIISIPDMDLILYEKFKFEKQSKNSNILFNYPALGAGLIHEHG HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHEECCC NIEIETIGNVLNINDSKIKKELKNINHIRKPKSAKSKKFLDLIKK CEEEEECCCEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure MEESALVAKAEKYLKEISNDSIRLDNIEEFENFKRLYYKLDDRLNSLQELKESMDAQGYT CCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TPFTSLNKYGTKAIAEVSLEEMSENSRHNQMFRMKANAKKNVLDRVKSAIDAHKIAIGHL CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHH EQCGYLKCDSCYKKYSLSEFRLKGEKCSCGHENFSFKINKDATYRLEIIPYLPLSGNYLV HHCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCEEE LMSELSGYGRNSFKKVLNILKQERKGLVKTISLVIRFRDENGRWIRKNVTLDSEYISNYE EEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCHHHHHHHH EEVRNRYGKDVRIEVLRFHRTKPAIIDDKYVRNALAISYVKYSEDIISSIKDSILKRKLS HHHHHHCCCCEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFKRINKYDAIRYKYENEIPGFIEEYDIGELESWRQSKITEEFEKLHFIDKFGNYNRSLK HHHHHCHHHHEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RDLKIRENIEKTIFENMAPTLMMWDIFRYYLTTSHNNRKISNGPFPYIRAELDRQQRKVF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH QTTFKKVIKVLNEFTDLKIISIPDMDLILYEKFKFEKQSKNSNILFNYPALGAGLIHEHG HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHEECCC NIEIETIGNVLNINDSKIKKELKNINHIRKPKSAKSKKFLDLIKK CEEEEECCCEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]