| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642121
Identifier: 148642121
GI number: 148642121
Start: 60289
End: 61476
Strand: Reverse
Name: 148642121
Synonym: Msm_0061
Alternate gene names: NA
Gene position: 61476-60289 (Counterclockwise)
Preceding gene: 148642122
Following gene: 148642120
Centisome position: 3.32
GC content: 22.98
Gene sequence:
>1188_bases ATGATTAAAAGAGAACATTATTTAAATCAAATAATTGATTTAATTGATAAGGATATTATTAAGATTTTAACAGGAGTTAG GCGTTCTGGCAAATCTGTATTGTTACAACAGGTTGTTAATCATTTAAAAAATAATGGAATAAAAGAGGAAAATATTATTT TCATTGATTTAGAATCACCAGACTTTCTTAGTTATTCAACAATAAATGACTTAAATGAATATATAAAAAGCAAATCTAAT AAAACAGATAAATATTACTTGTTTTTTGATGAAATTCAAAGAATTGAAGGTTGGCAAAGACTTGTAAATGCATATTTTTC ATTAGATAATTTTGATGTTTATGTTACAGGATCAAATTCTAAATTATTAAGTGGTGAATTTGCAACATATTTGACAGGAC GTTATATTAATATTAAAATATTTCCTTTTTCATTTGTTGAATATTTGGAATACAACAAAGATTCTAATTTGTCCGAAAAA GAATTATTCATGGAATATTTAACATTTGGGGGATTTCCAGCATCATTTGAATTGAATAATAAAATCCAATATTTAAAGGA CTTATTTGATTCAATTGTATTTAATGATATTGTAAAAAGGTTTGATATTAAAAATGTTGATTTGTTAATTAGATTAACTC ATTTTTTAGTATCAAATATAGGTCAGTTGGTTTCAGCTAATAGTATTGTTAAATATCTTAAAAAAGATAGGATAAATGTT TCTGTAAATACTGTTTATAATTATATTTCTTATCTTGAAGAGGCTTGTTTGATATATAAGGTGAAAAGAGAGGATTTAAT TGGTAAAAAAATATTAAATCATTTGGAGAAATATTATGTTGTGGATTTAGGTTTTAGAGAATCTATTTTAAAAAAAGATT TGGATATAGGTCAGTCTTTAGAAAATATTGTTTATTTTGAGTTACTTAGAAGAGGATATGAAGTTAATATTGGTAAATAC AATACTAAAGAAATTGATTTTATTTGCAGAAAAGGTTCTGAAAAAATTTATATTCAGGTAACTTATATTCTAGCTAATGA AGAAATTCATAAAAGAGAATTTGATCCACTTTTAAAGGTAAATGACAATTATCCAAAATATGTTCTTTCATTAGATGATT TTGATATGTCTTATATGGGAGTTAAACATCTTAATATTATAAATTTTTTAACAGGTAATGAGATTTAA
Upstream 100 bases:
>100_bases GAAATTTTTTAATAATTTTTTCAGTACAAAGAAAAAATTTCATTTAATTAAATATTTTTTCTATAGGTAATATTTTTTTT ATTAGAAATGGTGGTAAAAT
Downstream 100 bases:
>100_bases ATAATATTAAAAAGTAATTTTATAGTATGGATATTTCAGTTTTTGTTCCGGGTCACATTACCGGTTTTTTTAGCATTGAA AATAATGCAAATCCTTTAAA
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MIKREHYLNQIIDLIDKDIIKILTGVRRSGKSVLLQQVVNHLKNNGIKEENIIFIDLESPDFLSYSTINDLNEYIKSKSN KTDKYYLFFDEIQRIEGWQRLVNAYFSLDNFDVYVTGSNSKLLSGEFATYLTGRYINIKIFPFSFVEYLEYNKDSNLSEK ELFMEYLTFGGFPASFELNNKIQYLKDLFDSIVFNDIVKRFDIKNVDLLIRLTHFLVSNIGQLVSANSIVKYLKKDRINV SVNTVYNYISYLEEACLIYKVKREDLIGKKILNHLEKYYVVDLGFRESILKKDLDIGQSLENIVYFELLRRGYEVNIGKY NTKEIDFICRKGSEKIYIQVTYILANEEIHKREFDPLLKVNDNYPKYVLSLDDFDMSYMGVKHLNIINFLTGNEI
Sequences:
>Translated_395_residues MIKREHYLNQIIDLIDKDIIKILTGVRRSGKSVLLQQVVNHLKNNGIKEENIIFIDLESPDFLSYSTINDLNEYIKSKSN KTDKYYLFFDEIQRIEGWQRLVNAYFSLDNFDVYVTGSNSKLLSGEFATYLTGRYINIKIFPFSFVEYLEYNKDSNLSEK ELFMEYLTFGGFPASFELNNKIQYLKDLFDSIVFNDIVKRFDIKNVDLLIRLTHFLVSNIGQLVSANSIVKYLKKDRINV SVNTVYNYISYLEEACLIYKVKREDLIGKKILNHLEKYYVVDLGFRESILKKDLDIGQSLENIVYFELLRRGYEVNIGKY NTKEIDFICRKGSEKIYIQVTYILANEEIHKREFDPLLKVNDNYPKYVLSLDDFDMSYMGVKHLNIINFLTGNEI >Mature_395_residues MIKREHYLNQIIDLIDKDIIKILTGVRRSGKSVLLQQVVNHLKNNGIKEENIIFIDLESPDFLSYSTINDLNEYIKSKSN KTDKYYLFFDEIQRIEGWQRLVNAYFSLDNFDVYVTGSNSKLLSGEFATYLTGRYINIKIFPFSFVEYLEYNKDSNLSEK ELFMEYLTFGGFPASFELNNKIQYLKDLFDSIVFNDIVKRFDIKNVDLLIRLTHFLVSNIGQLVSANSIVKYLKKDRINV SVNTVYNYISYLEEACLIYKVKREDLIGKKILNHLEKYYVVDLGFRESILKKDLDIGQSLENIVYFELLRRGYEVNIGKY NTKEIDFICRKGSEKIYIQVTYILANEEIHKREFDPLLKVNDNYPKYVLSLDDFDMSYMGVKHLNIINFLTGNEI
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1544 and MJ1637 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46523; Mature: 46523
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKREHYLNQIIDLIDKDIIKILTGVRRSGKSVLLQQVVNHLKNNGIKEENIIFIDLESP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCC DFLSYSTINDLNEYIKSKSNKTDKYYLFFDEIQRIEGWQRLVNAYFSLDNFDVYVTGSNS CCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC KLLSGEFATYLTGRYINIKIFPFSFVEYLEYNKDSNLSEKELFMEYLTFGGFPASFELNN CEECCCHHHHCCCEEEEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEECC KIQYLKDLFDSIVFNDIVKRFDIKNVDLLIRLTHFLVSNIGQLVSANSIVKYLKKDRINV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE SVNTVYNYISYLEEACLIYKVKREDLIGKKILNHLEKYYVVDLGFRESILKKDLDIGQSL EHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHH ENIVYFELLRRGYEVNIGKYNTKEIDFICRKGSEKIYIQVTYILANEEIHKREFDPLLKV HHHHHHHHHHCCCEEECCCCCCHHHHHHEECCCCEEEEEEEEEEECCHHHHHHCCCCEEE NDNYPKYVLSLDDFDMSYMGVKHLNIINFLTGNEI CCCCCEEEEEECCCCCHHHCHHHHHHEEECCCCCC >Mature Secondary Structure MIKREHYLNQIIDLIDKDIIKILTGVRRSGKSVLLQQVVNHLKNNGIKEENIIFIDLESP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCC DFLSYSTINDLNEYIKSKSNKTDKYYLFFDEIQRIEGWQRLVNAYFSLDNFDVYVTGSNS CCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC KLLSGEFATYLTGRYINIKIFPFSFVEYLEYNKDSNLSEKELFMEYLTFGGFPASFELNN CEECCCHHHHCCCEEEEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEECC KIQYLKDLFDSIVFNDIVKRFDIKNVDLLIRLTHFLVSNIGQLVSANSIVKYLKKDRINV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE SVNTVYNYISYLEEACLIYKVKREDLIGKKILNHLEKYYVVDLGFRESILKKDLDIGQSL EHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHH ENIVYFELLRRGYEVNIGKYNTKEIDFICRKGSEKIYIQVTYILANEEIHKREFDPLLKV HHHHHHHHHHCCCEEECCCCCCHHHHHHEECCCCEEEEEEEEEEECCHHHHHHCCCCEEE NDNYPKYVLSLDDFDMSYMGVKHLNIINFLTGNEI CCCCCEEEEEECCCCCHHHCHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]