Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642122

Identifier: 148642122

GI number: 148642122

Start: 61702

End: 62208

Strand: Reverse

Name: 148642122

Synonym: Msm_0062

Alternate gene names: NA

Gene position: 62208-61702 (Counterclockwise)

Preceding gene: 148642125

Following gene: 148642121

Centisome position: 3.36

GC content: 31.76

Gene sequence:

>507_bases
ATGTCTGGAGATTTGATTTTATATTTTTCACGTGCAGGTGAAAATTATTATGAAGGTGATTTGAAAGTAGTTGAAAAAGG
AAACACTGAAGTAGTTGCAGATTATATTAAAGAGATAACTAATGGGGATGTTTTTAAGGTAGAACCGGAAATTCCCTATC
CTGAAGATTATATGGAATGTACTGAAGTAACTAAAAATGAGAAAAATGGCAGAGTATTAAAGGAAACCCTTGAAGATGTT
GGGGATTACGAAGGGGTTTATATAGGATTTCCCATTTGGTGGGGAAAAATGCCGATTGTTTTTGAATCTCAGTTAGATAA
ATTGGATTTTAAAGGTAAAGTTGTAAAACCTTTTGTTACTCATGAGGGTTCCGGTTTTGGAAAATCTAAAAAACAATTAA
AAAAGCTATGTAAAGGTGCAGATATTAGAAATGGTCTTGAAATTAAGGGCAGTGATGTTTTAGGTTCAAAAGACAAAGTC
AAATGTTGGATTAATGATAATTTATAA

Upstream 100 bases:

>100_bases
AAATATAATAAATAAATATTGCCCATTATTTTTTTTAAAATGGAATATACTTAATAACGGTTTTTTATATAAATTATATT
TAGATAATAAGGAGATATTT

Downstream 100 bases:

>100_bases
TTTTTTTTAAAGTTTTTTTTTATTTATTGCTGTTTTATGTAATATTTTTTTATAATTTAAATAATTTTAAATATTTTAAA
ATACTACTTTTAATTATAAA

Product: flavodoxin

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Flavodoxin Protein; Exported; Flavodoxin Family Protein; Lipoprotein

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSGDLILYFSRAGENYYEGDLKVVEKGNTEVVADYIKEITNGDVFKVEPEIPYPEDYMECTEVTKNEKNGRVLKETLEDV
GDYEGVYIGFPIWWGKMPIVFESQLDKLDFKGKVVKPFVTHEGSGFGKSKKQLKKLCKGADIRNGLEIKGSDVLGSKDKV
KCWINDNL

Sequences:

>Translated_168_residues
MSGDLILYFSRAGENYYEGDLKVVEKGNTEVVADYIKEITNGDVFKVEPEIPYPEDYMECTEVTKNEKNGRVLKETLEDV
GDYEGVYIGFPIWWGKMPIVFESQLDKLDFKGKVVKPFVTHEGSGFGKSKKQLKKLCKGADIRNGLEIKGSDVLGSKDKV
KCWINDNL
>Mature_167_residues
SGDLILYFSRAGENYYEGDLKVVEKGNTEVVADYIKEITNGDVFKVEPEIPYPEDYMECTEVTKNEKNGRVLKETLEDVG
DYEGVYIGFPIWWGKMPIVFESQLDKLDFKGKVVKPFVTHEGSGFGKSKKQLKKLCKGADIRNGLEIKGSDVLGSKDKVK
CWINDNL

Specific function: Unknown

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19016; Mature: 18885

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDLILYFSRAGENYYEGDLKVVEKGNTEVVADYIKEITNGDVFKVEPEIPYPEDYMEC
CCCCEEEEEECCCCCEECCCEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH
TEVTKNEKNGRVLKETLEDVGDYEGVYIGFPIWWGKMPIVFESQLDKLDFKGKVVKPFVT
HHHHCCCCCCHHHHHHHHHHCCCCCEEEECEEECCCCCEEECCCCCCCCCCCEEECEEEE
HEGSGFGKSKKQLKKLCKGADIRNGLEIKGSDVLGSKDKVKCWINDNL
CCCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
SGDLILYFSRAGENYYEGDLKVVEKGNTEVVADYIKEITNGDVFKVEPEIPYPEDYMEC
CCCEEEEEECCCCCEECCCEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH
TEVTKNEKNGRVLKETLEDVGDYEGVYIGFPIWWGKMPIVFESQLDKLDFKGKVVKPFVT
HHHHCCCCCCHHHHHHHHHHCCCCCEEEECEEECCCCCEEECCCCCCCCCCCEEECEEEE
HEGSGFGKSKKQLKKLCKGADIRNGLEIKGSDVLGSKDKVKCWINDNL
CCCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA