| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642119
Identifier: 148642119
GI number: 148642119
Start: 58882
End: 59421
Strand: Reverse
Name: 148642119
Synonym: Msm_0059
Alternate gene names: NA
Gene position: 59421-58882 (Counterclockwise)
Preceding gene: 148642120
Following gene: 148642118
Centisome position: 3.21
GC content: 30.56
Gene sequence:
>540_bases ATGATAAACATTAGCTATAATATAAAGGAATATAGAAAAGAGCTATTTAATATAGCTGATGACGGAAATACCATTATTGA GTTGGGATGTCATGTAGGAAACACTACAAAACTAATTTTGGATAAATTTGACAATGTAAAAATAATAGCTATTGATAATA GTCCTGAAGCTGTAGGGAAAATGGAAAAACTTGCTGATGATTATTCCAATTTAACATTTATATCTGGTGATGTAAGACGC CATGAGATTCTTCTGGAAGCTTTTAGGTTAACTCAAAAGTGTGATGTTTTATCTGTTGATTTAGGTGGAGGATATCATCC TGACACTGTTTTTAAAGTATTTTACATTTGGTCATCAACATTCAAACCAGTTCATTCAATAATTAGAAATAAAGGATTAG TTGATTTTTGTAATTCAGCTAGTGTAAGCTGCAAGGATTTTAAATCTCATGAAGGCCATCTGGAATCTTACATTGATGAA GGAATTCCTCCTCAAATTAAAGAATTTGAATTATGGACACCTTCTTTAAGGAAAAAATAG
Upstream 100 bases:
>100_bases GGAAATACTGTATTTGCCTTTGCATCTAATAGAGATGTTTTTAAAAACATGGATATTGAAGGCTTAAATATATATGAACT GGATAATATTGGTATAAAAT
Downstream 100 bases:
>100_bases CTAATTATAAATAATTTATTAACAAAAGTATATTTATTGATTAATAAGTAAATTTTTACTTGATTTTTTAAATAGGTTAT TTATAGGTGCAGTATGCCAA
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MINISYNIKEYRKELFNIADDGNTIIELGCHVGNTTKLILDKFDNVKIIAIDNSPEAVGKMEKLADDYSNLTFISGDVRR HEILLEAFRLTQKCDVLSVDLGGGYHPDTVFKVFYIWSSTFKPVHSIIRNKGLVDFCNSASVSCKDFKSHEGHLESYIDE GIPPQIKEFELWTPSLRKK
Sequences:
>Translated_179_residues MINISYNIKEYRKELFNIADDGNTIIELGCHVGNTTKLILDKFDNVKIIAIDNSPEAVGKMEKLADDYSNLTFISGDVRR HEILLEAFRLTQKCDVLSVDLGGGYHPDTVFKVFYIWSSTFKPVHSIIRNKGLVDFCNSASVSCKDFKSHEGHLESYIDE GIPPQIKEFELWTPSLRKK >Mature_179_residues MINISYNIKEYRKELFNIADDGNTIIELGCHVGNTTKLILDKFDNVKIIAIDNSPEAVGKMEKLADDYSNLTFISGDVRR HEILLEAFRLTQKCDVLSVDLGGGYHPDTVFKVFYIWSSTFKPVHSIIRNKGLVDFCNSASVSCKDFKSHEGHLESYIDE GIPPQIKEFELWTPSLRKK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20374; Mature: 20374
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINISYNIKEYRKELFNIADDGNTIIELGCHVGNTTKLILDKFDNVKIIAIDNSPEAVGK CEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEECCCCHHHHH MEKLADDYSNLTFISGDVRRHEILLEAFRLTQKCDVLSVDLGGGYHPDTVFKVFYIWSST HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCC FKPVHSIIRNKGLVDFCNSASVSCKDFKSHEGHLESYIDEGIPPQIKEFELWTPSLRKK CHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCEEECCCCHHCCC >Mature Secondary Structure MINISYNIKEYRKELFNIADDGNTIIELGCHVGNTTKLILDKFDNVKIIAIDNSPEAVGK CEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEECCCCHHHHH MEKLADDYSNLTFISGDVRRHEILLEAFRLTQKCDVLSVDLGGGYHPDTVFKVFYIWSST HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCC FKPVHSIIRNKGLVDFCNSASVSCKDFKSHEGHLESYIDEGIPPQIKEFELWTPSLRKK CHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCEEECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA