| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642096
Identifier: 148642096
GI number: 148642096
Start: 27314
End: 28018
Strand: Reverse
Name: 148642096
Synonym: Msm_0036
Alternate gene names: NA
Gene position: 28018-27314 (Counterclockwise)
Preceding gene: 148642101
Following gene: 148642095
Centisome position: 1.51
GC content: 27.38
Gene sequence:
>705_bases ATGTCAATTAGTTTAAAGGAAAAATTAGCTGAATTAATTTTTGAATATGATAAATTAAGGTTTCATATATGTCCAAAAAT TGAAGATATGTATCTGCTCAGTTTTGGTTTTCTTGAATGTGAAGCATATAATTTGGATATTGAATTGGAAATGATTAAAA GATATATTGAGCTGTTTAATCAGGGGGAGGATTTATCTAAAATTGATGAAATGCTTGATAATGAATTTGAAGAATCAGTT GGCATGTTGGAAAAATATATGGGTGAACTGGATCTGGCTATTGAGCGAAAGGATACTCATTTTGAGTTGTCTGAAGATGA TTTGGATAGTTTGAATAGTCTTTATTTGGATTTAATTTATAAATTGCATCCTTCTTTCAATCCTGTTCAAAGTATTTATG AAAAAGATTTGTTTGAAGAAATTGTGGAAGCTTTTGAAACTTATGATTTAACTTCCATGAGGTCTCTGGCTATTTTGATT CCTGAAGGCAAAACAATTTTTGAGGATGATGATGTTTTTATAAAATCAATCAGTCAGATCAATCAGGAAATTTATAATAT TAAAAATAGTTATCCTTACAATAAAAAAAAGATTCTTGATGATGAAAAGCTATTTAAGGATTATAAGATTCAGTTATTGG ATGTTGTAGCTAATGATTATTTGCTGATTGAAGAATACGGTAAAAAATTAGATGAATTAATTTAA
Upstream 100 bases:
>100_bases CGATTAATTCTTTAAGGTTATTTTCTTTTATTTCCATTTAAAATCACCTATATATCTATAAATATGTTTAATTCATATAT ATAGAATTAAGGTTTTAACA
Downstream 100 bases:
>100_bases ATATATAATGAGTATTCATCCTCCTAAACACCACTAAAGGAGTAATAGCGAATACTCATTTTTAACCATCACCATTGTTC GTATTCGTAAAAAAATAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSISLKEKLAELIFEYDKLRFHICPKIEDMYLLSFGFLECEAYNLDIELEMIKRYIELFNQGEDLSKIDEMLDNEFEESV GMLEKYMGELDLAIERKDTHFELSEDDLDSLNSLYLDLIYKLHPSFNPVQSIYEKDLFEEIVEAFETYDLTSMRSLAILI PEGKTIFEDDDVFIKSISQINQEIYNIKNSYPYNKKKILDDEKLFKDYKIQLLDVVANDYLLIEEYGKKLDELI
Sequences:
>Translated_234_residues MSISLKEKLAELIFEYDKLRFHICPKIEDMYLLSFGFLECEAYNLDIELEMIKRYIELFNQGEDLSKIDEMLDNEFEESV GMLEKYMGELDLAIERKDTHFELSEDDLDSLNSLYLDLIYKLHPSFNPVQSIYEKDLFEEIVEAFETYDLTSMRSLAILI PEGKTIFEDDDVFIKSISQINQEIYNIKNSYPYNKKKILDDEKLFKDYKIQLLDVVANDYLLIEEYGKKLDELI >Mature_233_residues SISLKEKLAELIFEYDKLRFHICPKIEDMYLLSFGFLECEAYNLDIELEMIKRYIELFNQGEDLSKIDEMLDNEFEESVG MLEKYMGELDLAIERKDTHFELSEDDLDSLNSLYLDLIYKLHPSFNPVQSIYEKDLFEEIVEAFETYDLTSMRSLAILIP EGKTIFEDDDVFIKSISQINQEIYNIKNSYPYNKKKILDDEKLFKDYKIQLLDVVANDYLLIEEYGKKLDELI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27786; Mature: 27655
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISLKEKLAELIFEYDKLRFHICPKIEDMYLLSFGFLECEAYNLDIELEMIKRYIELFN CCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCEEEEEECCCEEHHHHHHHHHHHC QGEDLSKIDEMLDNEFEESVGMLEKYMGELDLAIERKDTHFELSEDDLDSLNSLYLDLIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCHHHHHHHHHHHHHHHH KLHPSFNPVQSIYEKDLFEEIVEAFETYDLTSMRSLAILIPEGKTIFEDDDVFIKSISQI HHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCEEECCCHHHHHHHHHH NQEIYNIKNSYPYNKKKILDDEKLFKDYKIQLLDVVANDYLLIEEYGKKLDELI HHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHCC >Mature Secondary Structure SISLKEKLAELIFEYDKLRFHICPKIEDMYLLSFGFLECEAYNLDIELEMIKRYIELFN CCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCEEEEEECCCEEHHHHHHHHHHHC QGEDLSKIDEMLDNEFEESVGMLEKYMGELDLAIERKDTHFELSEDDLDSLNSLYLDLIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCHHHHHHHHHHHHHHHH KLHPSFNPVQSIYEKDLFEEIVEAFETYDLTSMRSLAILIPEGKTIFEDDDVFIKSISQI HHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEECCCCEEECCCHHHHHHHHHH NQEIYNIKNSYPYNKKKILDDEKLFKDYKIQLLDVVANDYLLIEEYGKKLDELI HHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA