Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642095

Identifier: 148642095

GI number: 148642095

Start: 26519

End: 27097

Strand: Reverse

Name: 148642095

Synonym: Msm_0035

Alternate gene names: NA

Gene position: 27097-26519 (Counterclockwise)

Preceding gene: 148642096

Following gene: 148642094

Centisome position: 1.46

GC content: 32.82

Gene sequence:

>579_bases
ATGTTTTCAAAAAAGCTTTTCTTATCATTACTTTTAATTGCTTTAATTATATCTGTTGGTTGTGTTAATGCAGTTGACAG
TTCCAATTGGAAAACTGTAAAGGTAAATGATGTAGATTTTAAAATTCCTCCAAAATATCAGGGCGGAGAAATCAATACTG
CCCGTACTAATTATCATTATAATGACCTGAACACATTTGGTATATTATGTGTTGATGATTATCTTCCAAGCAGTTACGGG
TGCTGGTATAATTTCAAAGGCAAAAACCTGACTATAGGTTCACATGATGTGGCATACTTCCATGAGTATAATAACTTTGC
AAAACATAATGTGTCCCATGCTTATTTTTCATCAGGAGATTCGATATACTGTATATCATGGGGCAGCGGAGAAATGACTG
ATGAAATGGAAGAAATCATAATCAACACTCCTGATTCTTCCTATGACACAGCTACATTTTACGGAATATTAAATGAAGCA
AAACAGGACTATGAAAAGGAAATGGTAAAGGAATATTCATATTATGCTCCGGCACCAAGTAAAGAAAGAAATAATTATTT
TATATTCTGGAGATATTGA

Upstream 100 bases:

>100_bases
CATATATTATTTTTATTTTTTAGATATATAAACTTTTATAATCGATTTTAAAATGTTTGTTAATAAAATGTTATATACTA
GTTAGTACAAATAGATTAGT

Downstream 100 bases:

>100_bases
AAAGGTGATTAAATGAAAGAATGTCCAAAATGCGGCAGTAAATATGGAGATAATAACAGCAATTATTGTATTGACTGCGG
ATCAAGACTTTTTGATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MFSKKLFLSLLLIALIISVGCVNAVDSSNWKTVKVNDVDFKIPPKYQGGEINTARTNYHYNDLNTFGILCVDDYLPSSYG
CWYNFKGKNLTIGSHDVAYFHEYNNFAKHNVSHAYFSSGDSIYCISWGSGEMTDEMEEIIINTPDSSYDTATFYGILNEA
KQDYEKEMVKEYSYYAPAPSKERNNYFIFWRY

Sequences:

>Translated_192_residues
MFSKKLFLSLLLIALIISVGCVNAVDSSNWKTVKVNDVDFKIPPKYQGGEINTARTNYHYNDLNTFGILCVDDYLPSSYG
CWYNFKGKNLTIGSHDVAYFHEYNNFAKHNVSHAYFSSGDSIYCISWGSGEMTDEMEEIIINTPDSSYDTATFYGILNEA
KQDYEKEMVKEYSYYAPAPSKERNNYFIFWRY
>Mature_192_residues
MFSKKLFLSLLLIALIISVGCVNAVDSSNWKTVKVNDVDFKIPPKYQGGEINTARTNYHYNDLNTFGILCVDDYLPSSYG
CWYNFKGKNLTIGSHDVAYFHEYNNFAKHNVSHAYFSSGDSIYCISWGSGEMTDEMEEIIINTPDSSYDTATFYGILNEA
KQDYEKEMVKEYSYYAPAPSKERNNYFIFWRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22179; Mature: 22179

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKKLFLSLLLIALIISVGCVNAVDSSNWKTVKVNDVDFKIPPKYQGGEINTARTNYHY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECCCCCCCCEEEEEECCEEE
NDLNTFGILCVDDYLPSSYGCWYNFKGKNLTIGSHDVAYFHEYNNFAKHNVSHAYFSSGD
CCCCEEEEEEEECCCCCCCCCEEEECCCEEEECCCCEEEEEHHCCHHHCCCCEEEECCCC
SIYCISWGSGEMTDEMEEIIINTPDSSYDTATFYGILNEAKQDYEKEMVKEYSYYAPAPS
EEEEEEECCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KERNNYFIFWRY
CCCCCEEEEEEC
>Mature Secondary Structure
MFSKKLFLSLLLIALIISVGCVNAVDSSNWKTVKVNDVDFKIPPKYQGGEINTARTNYHY
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECCCCCCCCEEEEEECCEEE
NDLNTFGILCVDDYLPSSYGCWYNFKGKNLTIGSHDVAYFHEYNNFAKHNVSHAYFSSGD
CCCCEEEEEEEECCCCCCCCCEEEECCCEEEECCCCEEEEEHHCCHHHCCCCEEEECCCC
SIYCISWGSGEMTDEMEEIIINTPDSSYDTATFYGILNEAKQDYEKEMVKEYSYYAPAPS
EEEEEEECCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KERNNYFIFWRY
CCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA