| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is glmM
Identifier: 148381360
GI number: 148381360
Start: 3660438
End: 3661787
Strand: Reverse
Name: glmM
Synonym: CBO3420
Alternate gene names: 148381360
Gene position: 3661787-3660438 (Counterclockwise)
Preceding gene: 148381361
Following gene: 148381359
Centisome position: 94.21
GC content: 31.63
Gene sequence:
>1350_bases ATGGGTAGAATGTTCGGAACAGATGGAGTCAGAGGAATAGCTAATAAGGAATTAACAGCAGACTTAGCATATAAATTAGG TAAAGCAGGAGCTTTTATATTAACAGAAGGAACACATAGATCTAAGATACTTGTAGGTATGGATACAAGAATATCAGGGG ACATGCTAGAGAGTGCTTTAGTAGCAGGTATATTATCTGTGGGAGCAGAAGCTATTTGTGTAGGTGTAATACCAACACCA GCAATAGCTTACTTAACAAGAAAGTATAATGCGGATGCAGGGGTTGTTATTTCAGCATCACATAATCCAGTAGAATACAA TGGTATAAAGTTTTTTAATAAAAATGGATACAAATTATCCGATGAATTAGAAGATAGTATACAAGCATTAATAAGAGATG ATTTTAAGGATGTTCCAGTTTTAACTGGAGAAAATATAGGAAGAAAGATTGAAGAAGATGGAGAGGCTATAAGAGATTAC ATAGATTTTGCTAAATCAACTATAAAGGGTGATTTGAAAGGATTAAAAGTAGCTTTAGATTGTGCTAATGGAGCATCATA TATAACATCTGTAGAAGCTTTTAAAGAATTAGGAGCAGAAGTTCATGTTATAAACAACAAACCTGATGGTATAAATATAA ATAGAAACTCTGGCTCAACACACCCAGAAGATCTTATGGAGTATGTAGTTAAAAATAATTGCCACATGGGATTAGCTTTT GATGGAGATGCGGATAGATGTCTAGCCATAGATGAAAAAGGTAATTTGATAAATGGAGACTTTATATTAGCCATTTGTGG TAAGGAATTAAAAAAACAAGGTAGATTAAAGAAAAATACAATAGTAGTTACTGTAATGAGTAATCTTGGATTAGATATAG CTATGAAAAAAGAAGAAATAAATACTATAAAAACAAAAGTTGGAGATAGATATGTCCTAGAAGAAATGCTTAAAAATGAT TATGCAATAGGTGGAGAACAATCAGGACATATTATATTCTCAGATTATAACACTACAGGGGATGGACTTGTAACTGCTCT ACAATTAGCTCATATAGTAAAAGAAAGTGGTAAGACTTTTTCAGAACTATGTTCTATAATGAAAGAACTACCACAAGTTT TAGTTAATGCTAAAGTTCCTAATGATCAAAAAGATATTTATTTGAAGGATGAAGAAATAAAATCTGAAATAGATACAATT ACAAAAAATTTAGATGGCTCAGGAAGAGTGCTTATAAGACCTTCTGGTACAGAGCCTTTAGTAAGAGTAATGCTTGAAGG GGAAAACCAAAAGGAAATTGATAAATTAGCACATGGCTTAGCTAAATTAATAGAGAATAAAGTAAAATAA
Upstream 100 bases:
>100_bases ACTGGCTTTTTATATTTTTCAATTATGTTTCCTATTGTTAGAATTAGTAAACTATAATATAATATCTATGTGTATTTAAA AAATAGGAGTGATGAATTAC
Downstream 100 bases:
>100_bases TAGGATTAATTTATATTTTTAAAACATAAGGGTAATTTATAATTATTAGGTTAATTATAAATTACCCTTATGTTTTTTAT TATAATAAATAAAATTAAAA
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MGRMFGTDGVRGIANKELTADLAYKLGKAGAFILTEGTHRSKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTP AIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDY IDFAKSTIKGDLKGLKVALDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF DGDADRCLAIDEKGNLINGDFILAICGKELKKQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKND YAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTI TKNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK
Sequences:
>Translated_449_residues MGRMFGTDGVRGIANKELTADLAYKLGKAGAFILTEGTHRSKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTP AIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDY IDFAKSTIKGDLKGLKVALDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF DGDADRCLAIDEKGNLINGDFILAICGKELKKQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKND YAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTI TKNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK >Mature_448_residues GRMFGTDGVRGIANKELTADLAYKLGKAGAFILTEGTHRSKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTPA IAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYI DFAKSTIKGDLKGLKVALDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAFD GDADRCLAIDEKGNLINGDFILAICGKELKKQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKNDY AIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTIT KNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=446, Percent_Identity=43.0493273542601, Blast_Score=334, Evalue=8e-93, Organism=Escherichia coli, GI1788361, Length=448, Percent_Identity=30.5803571428571, Blast_Score=157, Evalue=2e-39, Organism=Drosophila melanogaster, GI17864244, Length=358, Percent_Identity=25.6983240223464, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_CLOB1 (A7FZ14)
Other databases:
- EMBL: CP000726 - RefSeq: YP_001385737.1 - ProteinModelPortal: A7FZ14 - SMR: A7FZ14 - STRING: A7FZ14 - GeneID: 5394742 - GenomeReviews: CP000726_GR - KEGG: cba:CLB_3477 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: VHDRYIE - ProtClustDB: PRK14316 - BioCyc: CBOT441770:CLB_3477-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 48894; Mature: 48762
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 100-100
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRMFGTDGVRGIANKELTADLAYKLGKAGAFILTEGTHRSKILVGMDTRISGDMLESAL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHH VAGILSVGAEAICVGVIPTPAIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLS HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCEEECCEEEECCCCCEEH DELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYIDFAKSTIKGDLKGLKVALD HHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE CANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF ECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEE DGDADRCLAIDEKGNLINGDFILAICGKELKKQGRLKKNTIVVTVMSNLGLDIAMKKEEI CCCCCCEEEEECCCCEECCCEEEEECCHHHHHCCCCCCCEEEEEEHHHCCCEEEECHHHH NTIKTKVGDRYVLEEMLKNDYAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTF HHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCH SELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTITKNLDGSGRVLIRPSGTEPL HHHHHHHHHHHHHHEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH VRVMLEGENQKEIDKLAHGLAKLIENKVK HHEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRMFGTDGVRGIANKELTADLAYKLGKAGAFILTEGTHRSKILVGMDTRISGDMLESAL CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHH VAGILSVGAEAICVGVIPTPAIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLS HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCEEECCEEEECCCCCEEH DELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYIDFAKSTIKGDLKGLKVALD HHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE CANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF ECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEE DGDADRCLAIDEKGNLINGDFILAICGKELKKQGRLKKNTIVVTVMSNLGLDIAMKKEEI CCCCCCEEEEECCCCEECCCEEEEECCHHHHHCCCCCCCEEEEEEHHHCCCEEEECHHHH NTIKTKVGDRYVLEEMLKNDYAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTF HHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCH SELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTITKNLDGSGRVLIRPSGTEPL HHHHHHHHHHHHHHEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH VRVMLEGENQKEIDKLAHGLAKLIENKVK HHEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA