Click here to switch to the map view.

The map label for this gene is yhbQ [C]

Identifier: 148381287

GI number: 148381287

Start: 3576455

End: 3576718

Strand: Reverse

Name: yhbQ [C]

Synonym: CBO3345

Alternate gene names: 148381287

Gene position: 3576718-3576455 (Counterclockwise)

Preceding gene: 148381288

Following gene: 148381286

Centisome position: 92.02

GC content: 29.17

Gene sequence:

>264_bases
TTGAGAAAAGGATTGTTTTATATGTCATATGTTTATATCGTAGAGTGCAGGGATGGAACTTTATATACAGGATGGACAAC
GGATATTGAAAGAAGAATAGGTCAGCACAATAAAGGAACAGGTGCAAAATATACAAGAGCAAGAAGACCAGTAGTTTTAA
AATATTTTGAGAAATTTGATACAAAAAGAGAAGCTATGAAAAGGGAATGTGAAATAAAAATGTTGTCTAGAAAGGATAAA
ATAAAATTATTTGATTATAATTAG

Upstream 100 bases:

>100_bases
GTTTTAAAATTTCAGGTAAAGAAATAATAATTATAGAAAATAATAATACATTAAGCAGTAATTTTATTATAAATGTAGAA
TATATAAGATGTAGAATATA

Downstream 100 bases:

>100_bases
TCGAAATGGTAAATAATAATATTATTATTTACAAAAATAATAAAAAACATAGGATTAAATATAAATATAAAGTTATAAAA
ATTAAACTTAGTTAAGCTAT

Product: GIY-YIG domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MRKGLFYMSYVYIVECRDGTLYTGWTTDIERRIGQHNKGTGAKYTRARRPVVLKYFEKFDTKREAMKRECEIKMLSRKDK
IKLFDYN

Sequences:

>Translated_87_residues
MRKGLFYMSYVYIVECRDGTLYTGWTTDIERRIGQHNKGTGAKYTRARRPVVLKYFEKFDTKREAMKRECEIKMLSRKDK
IKLFDYN
>Mature_87_residues
MRKGLFYMSYVYIVECRDGTLYTGWTTDIERRIGQHNKGTGAKYTRARRPVVLKYFEKFDTKREAMKRECEIKMLSRKDK
IKLFDYN

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 10544; Mature: 10544

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGLFYMSYVYIVECRDGTLYTGWTTDIERRIGQHNKGTGAKYTRARRPVVLKYFEKFD
CCCCEEEEEEEEEEEECCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC
TKREAMKRECEIKMLSRKDKIKLFDYN
HHHHHHHHHHHHHCCCCCCCEEEEECC
>Mature Secondary Structure
MRKGLFYMSYVYIVECRDGTLYTGWTTDIERRIGQHNKGTGAKYTRARRPVVLKYFEKFD
CCCCEEEEEEEEEEEECCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC
TKREAMKRECEIKMLSRKDKIKLFDYN
HHHHHHHHHHHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11016950 [H]