| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380977
Identifier: 148380977
GI number: 148380977
Start: 3220299
End: 3221279
Strand: Reverse
Name: 148380977
Synonym: CBO3028
Alternate gene names: NA
Gene position: 3221279-3220299 (Counterclockwise)
Preceding gene: 148380978
Following gene: 148380976
Centisome position: 82.87
GC content: 25.08
Gene sequence:
>981_bases TTGAGCCTACCTAAGTATATAATTAATTTTGAAGAGCTTACAGAGGATTTAAAAAATCATTTATTAAGTCTGATAGATGA TAATATAAGAACTAATTATCCAGAGATAAATACCAACAATATACAAGATTTACTACAACAATTAAAGAATTTATTGCCAA GTGTACAATATGAAGGATTAAAGAAAAAAATTGATGCCTTTATATACAGAAAAATTGAAGGCATTCAAAAGGTGAAAGGT ATATTATTAGATATCCCAGCAATACAAAATGATTACAAAGAACAATTTAAATTTGATAAAGATGTATATATTACAGGATT GCATTTTAATCAAACAGGCTGGAAAAAGGAAGATAAATATAGCTTAGAAATTAATAAAATTAAAATAATAGATAATGTAA CAACTAAGGAAATAGGAGAGCATAAATACTTTAATACATTCTATAAAGTAAATGCTAATACGCCTATTTCTTTTGTTTTT CATAATTTAAGCGGCAATAGTAGACAGATAATTGTGGATTTAGAGTATATAGATGGAGAAGATTCTAGTATTACAGTAGA GCCACCACCAGGCATAGAGGATATAGATAATGAATGGGATATAGCAGTAGTAATGAATTGGGAAGAAAATACAGATGCAG ATATAGATTTACATGGCAAGATAGATGATAAAAAAGTTTGGTATGGGAATAAATCCTATGATGGATTTTATCTTAATTTT GATTATACAAGTCATAAAACAAACAAAAATCCTGAAATAATAAGTGTTAAAGGGTACAAAAATAAAAAGCTTCTTATAAG TATAAAGAATTTTAATGGAGTAGAACTAAAAGAACCTGTAACTTTGGAAATATATCAATATAGACCTTATGGTAATAAAC TACTTAAAAAATTTAATGTGAATTTAGATACAAATAGAGATTTAAAAGATATATTTATAATGGACTTAAATACTTTAAAA ATAACAAATTTAAATAAATAA
Upstream 100 bases:
>100_bases TTTAATATTAAAAATCCTTATTTAAAGATAACACAAACAGCTCAAGTTTATCCAAGAAATGATACAAGTTCAATCTTTGA ATATAAAGAAGGTGCTTAAT
Downstream 100 bases:
>100_bases TTGATAACAGGAGGTAGATAAAATGGCTACAGATAATTTTTATTTTGTTGAAGGAAATACAAGTGTAAAAAACTTAGTAA AAACATTAGCAGCTGAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKNLLPSVQYEGLKKKIDAFIYRKIEGIQKVKG ILLDIPAIQNDYKEQFKFDKDVYITGLHFNQTGWKKEDKYSLEINKIKIIDNVTTKEIGEHKYFNTFYKVNANTPISFVF HNLSGNSRQIIVDLEYIDGEDSSITVEPPPGIEDIDNEWDIAVVMNWEENTDADIDLHGKIDDKKVWYGNKSYDGFYLNF DYTSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNVNLDTNRDLKDIFIMDLNTLK ITNLNK
Sequences:
>Translated_326_residues MSLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKNLLPSVQYEGLKKKIDAFIYRKIEGIQKVKG ILLDIPAIQNDYKEQFKFDKDVYITGLHFNQTGWKKEDKYSLEINKIKIIDNVTTKEIGEHKYFNTFYKVNANTPISFVF HNLSGNSRQIIVDLEYIDGEDSSITVEPPPGIEDIDNEWDIAVVMNWEENTDADIDLHGKIDDKKVWYGNKSYDGFYLNF DYTSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNVNLDTNRDLKDIFIMDLNTLK ITNLNK >Mature_325_residues SLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKNLLPSVQYEGLKKKIDAFIYRKIEGIQKVKGI LLDIPAIQNDYKEQFKFDKDVYITGLHFNQTGWKKEDKYSLEINKIKIIDNVTTKEIGEHKYFNTFYKVNANTPISFVFH NLSGNSRQIIVDLEYIDGEDSSITVEPPPGIEDIDNEWDIAVVMNWEENTDADIDLHGKIDDKKVWYGNKSYDGFYLNFD YTSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNVNLDTNRDLKDIFIMDLNTLKI TNLNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38165; Mature: 38034
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKNLLPSVQYEGL CCCCHHEECHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH KKKIDAFIYRKIEGIQKVKGILLDIPAIQNDYKEQFKFDKDVYITGLHFNQTGWKKEDKY HHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCE SLEINKIKIIDNVTTKEIGEHKYFNTFYKVNANTPISFVFHNLSGNSRQIIVDLEYIDGE EEEEEEEEEEECCCHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCC DSSITVEPPPGIEDIDNEWDIAVVMNWEENTDADIDLHGKIDDKKVWYGNKSYDGFYLNF CCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCEEEECCCCCCEEEEEE DYTSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNV EECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEECCCEEEEEEEECCCHHHHHHHHCC NLDTNRDLKDIFIMDLNTLKITNLNK CCCCCCCCCEEEEEECCEEEEEECCC >Mature Secondary Structure SLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKNLLPSVQYEGL CCCHHEECHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH KKKIDAFIYRKIEGIQKVKGILLDIPAIQNDYKEQFKFDKDVYITGLHFNQTGWKKEDKY HHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCE SLEINKIKIIDNVTTKEIGEHKYFNTFYKVNANTPISFVFHNLSGNSRQIIVDLEYIDGE EEEEEEEEEEECCCHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCC DSSITVEPPPGIEDIDNEWDIAVVMNWEENTDADIDLHGKIDDKKVWYGNKSYDGFYLNF CCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCEEEECCCCCCEEEEEE DYTSHKTNKNPEIISVKGYKNKKLLISIKNFNGVELKEPVTLEIYQYRPYGNKLLKKFNV EECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEECCCEEEEEEEECCCHHHHHHHHCC NLDTNRDLKDIFIMDLNTLKITNLNK CCCCCCCCCEEEEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA