Definition Clostridium botulinum A str. ATCC 3502, complete genome.
Accession NC_009495
Length 3,886,916

Click here to switch to the map view.

The map label for this gene is 148380978

Identifier: 148380978

GI number: 148380978

Start: 3221281

End: 3222630

Strand: Reverse

Name: 148380978

Synonym: CBO3029

Alternate gene names: NA

Gene position: 3222630-3221281 (Counterclockwise)

Preceding gene: 148380979

Following gene: 148380977

Centisome position: 82.91

GC content: 27.85

Gene sequence:

>1350_bases
ATGGGATTACCTTCCTATGTAGTCAACTTTGATGAACTATCAGATCTTATTAAAGATTATTTACAAAATGGTGTGAAAGT
TGACATAGGCAATATAAATTTTTCTACCAAAGATATGGAAAATTTATTATCAGAAATTAAAGATAAAATACAAGGTGTAG
ATTATAATGATTTAATAAATGCGTTAAATGCTTTAGGTGTAAAGTTAGATAATTTAAGTGGAAATTTAGGTATATCAGGC
ACACAGAAAATTTATGGGAAAATGCTAGAGATTCCTGCAGTAAAAGGACAGCATATAATAGAATTTAAGGGAAATGGACA
AATAACAGGTATAACATATTCTCAATCTAGTTGGAGATTTGAAGATAGCTGGGATTTACAAGTAGGTAATGATAAATTAT
TTGAAAGTGTACGCACTAAAGAATATGGTGAACATAAATTTTTAAATGTATTTTATCCTATAAATGGTACAGTCAAATTT
ATTTACAATAATATTAGTGGAACTAGTAAAGTTTTATGGGTAGATTTTAATATATTAGAAAATAGTAATTTACCTACACC
TACTACACCTACTATACCTACCACTAGTGAAAAAAACTATAGATTTTTAGCTATAGGAGAAAGTGAATATACTTTACAAG
GCGCTAATAACCTTATGGGTTGCACATATGATGCTGACAATATATCTAATTTATTTAAAGAGCATAAAGAAAGTGCTAAA
TTTACAAAAAATATAGTTGCAAAAAATAAAACTAAATCAGAAGCATTAAATTTAATAAAAAACACTTTTCAAGATGCACA
AGATAATGATATTAGTTATTTGTTTTGGTCTGGACATGGTACTGTATATGAAGATAAGTTTGCTTTAGTAGCAAAAGATA
ACATAATAACAGTATATGAATTACAAACAATACTGGATGATATAAAAGGCACTAAGGTAATATTTATTGATACTTGCCAC
AGTGGACTTGCTATAGATAAAAATTTTGCATATACATTAGCTGTAGTGGAGGAGAAACTTAGAAGTATAGACAAAACATT
AAATAAACAAGGATATAAGGTTTTAACAGCTAGTGCAGGGTCAGAAACATCCGGTGACTTGAGCGCTGGATATAATGGAA
ATCCTAATCCTTCAGGAGCTTTTACATGGGCATTAACACAAAGCATTAAAACTAAAAAATCTGATAAAGATAAAAATAGA
ATTGTAACTTTGGAAGAATTATATCAAAGTGTATTACATTTTTATGATGAATTTAATATTAAAAATCCTTATTTAAAGAT
AACACAAACAGCTCAAGTTTATCCAAGAAATGATACAAGTTCAATCTTTGAATATAAAGAAGGTGCTTAA

Upstream 100 bases:

>100_bases
AAACAACGTACCCTAATAATACAAATAAAACAATACAATTAATTAAAGATAATCATGGTAAATTAGAAACAATAGATTAT
GTATAGGAGGTGGCAATAAT

Downstream 100 bases:

>100_bases
TTTGAGCCTACCTAAGTATATAATTAATTTTGAAGAGCTTACAGAGGATTTAAAAAATCATTTATTAAGTCTGATAGATG
ATAATATAAGAACTAATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MGLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLINALNALGVKLDNLSGNLGISG
TQKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRFEDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKF
IYNNISGTSKVLWVDFNILENSNLPTPTTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAK
FTKNIVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYELQTILDDIKGTKVIFIDTCH
SGLAIDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAGSETSGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNR
IVTLEELYQSVLHFYDEFNIKNPYLKITQTAQVYPRNDTSSIFEYKEGA

Sequences:

>Translated_449_residues
MGLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLINALNALGVKLDNLSGNLGISG
TQKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRFEDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKF
IYNNISGTSKVLWVDFNILENSNLPTPTTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAK
FTKNIVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYELQTILDDIKGTKVIFIDTCH
SGLAIDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAGSETSGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNR
IVTLEELYQSVLHFYDEFNIKNPYLKITQTAQVYPRNDTSSIFEYKEGA
>Mature_448_residues
GLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLINALNALGVKLDNLSGNLGISGT
QKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRFEDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKFI
YNNISGTSKVLWVDFNILENSNLPTPTTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAKF
TKNIVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYELQTILDDIKGTKVIFIDTCHS
GLAIDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAGSETSGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNRI
VTLEELYQSVLHFYDEFNIKNPYLKITQTAQVYPRNDTSSIFEYKEGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50377; Mature: 50246

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLIN
CCCCHHEECHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
ALNALGVKLDNLSGNLGISGTQKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRF
HHHHHCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCCC
EDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKFIYNNISGTSKVLWVDFNILE
CCCCCEEECCHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEE
NSNLPTPTTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAK
CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHH
FTKNIVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYE
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCEEEEEECCEEEEEE
LQTILDDIKGTKVIFIDTCHSGLAIDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAG
HHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SETSGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNRIVTLEELYQSVLHFYDEFNI
CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCC
KNPYLKITQTAQVYPRNDTSSIFEYKEGA
CCCEEEEEEEEEEEECCCCHHHHHCCCCC
>Mature Secondary Structure 
GLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLIN
CCCHHEECHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
ALNALGVKLDNLSGNLGISGTQKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRF
HHHHHCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCCC
EDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKFIYNNISGTSKVLWVDFNILE
CCCCCEEECCHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEE
NSNLPTPTTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAK
CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHH
FTKNIVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYE
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCEEEEEECCEEEEEE
LQTILDDIKGTKVIFIDTCHSGLAIDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAG
HHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SETSGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNRIVTLEELYQSVLHFYDEFNI
CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCC
KNPYLKITQTAQVYPRNDTSSIFEYKEGA
CCCEEEEEEEEEEEECCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA