| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148380971
Identifier: 148380971
GI number: 148380971
Start: 3212906
End: 3214663
Strand: Reverse
Name: 148380971
Synonym: CBO3022
Alternate gene names: NA
Gene position: 3214663-3212906 (Counterclockwise)
Preceding gene: 148380972
Following gene: 148380970
Centisome position: 82.7
GC content: 24.74
Gene sequence:
>1758_bases ATGGATAATTCGATATTTTGCTATTTAGATAATTCAAATGGAAATGATTTAAATATAGGGACAACAAAAGACAAAGCTTT TAAAACTATAGGTAAAGCTAAAGATTTTATAAAAAACAATGGTGGTATTGGGGATGTGTATATAATTGGATATTATAACA TTCCATCATTTGAATTAGTTAACAATGATATTTTTTTAAATATAATAGGTATTTCTAAACAAAGTGAAATATATTATGTA CATCCATTTGGAGATAATGTAAACTGTTTAAAAAATGTAAATTTTTACAAACTAAAAGTTTCATGTGGTGATAGTAGATT TAATTATCATCCATATACAGAAAACGTAAATTTTTATAATTGTATTATTACTTTTTCTGGGTGTCCTTTTTATGGATATA AAAGTAATTTTTATAATTGTATATTTGAAAATGCATTAACAAGTATAGATTATAGGTTTTCTGATGGAAATGTTTATAGA ATAGGAGGAAAATTTTCAAATTGCATTTTCAATAAAAATATTTTTAACGAAAAAACTAATTTTATTTCCGCAATCAAACA ATCTTACAATTTATCTGTAGATAATATATATTTTTATATTAATGAGAAAAATAAAAATGATATTTCTATAAGAAATAATG GAGACATCAATATTTTAAATGAAGATGGGACAAGAAGTGATATAGGTATATATGGAGGTATGACCCCGTATATATTTAAT TTTTATAAATTTTTGCTAAAACAAAATCAAAATTATTATACAATAAAATCCGAATTTTATAAAAATAACAATTACAAGCC TATAACCGAATTAGAAGGCAAAGAAGTATTAACACAAAATAATTTTGAAACTTATGGCATAGATGATTTAAATTTATTAA CTAAAACTATAGATACTCGGGTTATTAATGGTATAGATAAGGGTAGATTGGGTAGTGGAAAGTATTTTGAGGTTGGTTTA TATAATTGCTGCAAGAGGGTAAAATCACAACCGGTATTAGATTATACTGATAATATAATGCCGCAGATGAACGCGTCTAC TGTGAATGGAATTACTGTTACCGCTAGTAGTACTGAAGGTAATTATTATCCATATCAAGCCTTTGATAGAAATCCGTCTA ATGCTTATGCATGGAGCTCAAATAGGTACGATAGTCCTGAAATAAGACAGAGTGCAAATTTATATATAAACTTCAATACT TTAACTAGAAAAGTATCAAAATATAAGATCTTATCATACTACTGCTATCCTTATGACATTAAATTGTATGGAAGTAATGA TAATACTGATTGGAAATTATTGGATGAAAGAAATAATGTAGTTTCTGAATATAAATGGTATGATTTTAAATTTAAAAATA CAATAAATTATCAATATTATAAATTTAATTTTAAAACAAATGAGGAAAAAGTATTTATTAATGAAATGGAATTAATGGAG TTAATTATACCGTTTAAATATTTAATCGAATATAATTCTCAACTTTATACATTCAATAACACAGAAATAATTCTATCATC ATCACAAGTATTAGATGAAAATAACTTTATAAATAATGGGTTTGTAGATGCAACGGCAATTACAGAGGAGCAATGGAATA CTGCTTTTTCAGATAAGTCTAATCTCAAACTTCTAATATGGACAGATGATATGAGTAAAACTGATGTCAATATAGAAACA GAAACAATTCCGTTTAGACCAATAGACAAATTAAAGAAAAATAGTGATATTTGTAATATATTATTTAAGGAAGTGTAG
Upstream 100 bases:
>100_bases TAGCTGAGTGTTATTTTTAGACACTCAGTTTTTATTTTAGAAATTGTGATAAATAATAGATTTTAAATTAAATTTTTAAA GAAAGGGTGATAAGGGTATT
Downstream 100 bases:
>100_bases GAGGTGATATAAGATGGCTACAATAGGAGAACAATTATTACAAACTGAAAGTGGTTGGAAAAGATATGATGATACTGATA AAAACATCAGCTACATCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MDNSIFCYLDNSNGNDLNIGTTKDKAFKTIGKAKDFIKNNGGIGDVYIIGYYNIPSFELVNNDIFLNIIGISKQSEIYYV HPFGDNVNCLKNVNFYKLKVSCGDSRFNYHPYTENVNFYNCIITFSGCPFYGYKSNFYNCIFENALTSIDYRFSDGNVYR IGGKFSNCIFNKNIFNEKTNFISAIKQSYNLSVDNIYFYINEKNKNDISIRNNGDINILNEDGTRSDIGIYGGMTPYIFN FYKFLLKQNQNYYTIKSEFYKNNNYKPITELEGKEVLTQNNFETYGIDDLNLLTKTIDTRVINGIDKGRLGSGKYFEVGL YNCCKRVKSQPVLDYTDNIMPQMNASTVNGITVTASSTEGNYYPYQAFDRNPSNAYAWSSNRYDSPEIRQSANLYINFNT LTRKVSKYKILSYYCYPYDIKLYGSNDNTDWKLLDERNNVVSEYKWYDFKFKNTINYQYYKFNFKTNEEKVFINEMELME LIIPFKYLIEYNSQLYTFNNTEIILSSSQVLDENNFINNGFVDATAITEEQWNTAFSDKSNLKLLIWTDDMSKTDVNIET ETIPFRPIDKLKKNSDICNILFKEV
Sequences:
>Translated_585_residues MDNSIFCYLDNSNGNDLNIGTTKDKAFKTIGKAKDFIKNNGGIGDVYIIGYYNIPSFELVNNDIFLNIIGISKQSEIYYV HPFGDNVNCLKNVNFYKLKVSCGDSRFNYHPYTENVNFYNCIITFSGCPFYGYKSNFYNCIFENALTSIDYRFSDGNVYR IGGKFSNCIFNKNIFNEKTNFISAIKQSYNLSVDNIYFYINEKNKNDISIRNNGDINILNEDGTRSDIGIYGGMTPYIFN FYKFLLKQNQNYYTIKSEFYKNNNYKPITELEGKEVLTQNNFETYGIDDLNLLTKTIDTRVINGIDKGRLGSGKYFEVGL YNCCKRVKSQPVLDYTDNIMPQMNASTVNGITVTASSTEGNYYPYQAFDRNPSNAYAWSSNRYDSPEIRQSANLYINFNT LTRKVSKYKILSYYCYPYDIKLYGSNDNTDWKLLDERNNVVSEYKWYDFKFKNTINYQYYKFNFKTNEEKVFINEMELME LIIPFKYLIEYNSQLYTFNNTEIILSSSQVLDENNFINNGFVDATAITEEQWNTAFSDKSNLKLLIWTDDMSKTDVNIET ETIPFRPIDKLKKNSDICNILFKEV >Mature_585_residues MDNSIFCYLDNSNGNDLNIGTTKDKAFKTIGKAKDFIKNNGGIGDVYIIGYYNIPSFELVNNDIFLNIIGISKQSEIYYV HPFGDNVNCLKNVNFYKLKVSCGDSRFNYHPYTENVNFYNCIITFSGCPFYGYKSNFYNCIFENALTSIDYRFSDGNVYR IGGKFSNCIFNKNIFNEKTNFISAIKQSYNLSVDNIYFYINEKNKNDISIRNNGDINILNEDGTRSDIGIYGGMTPYIFN FYKFLLKQNQNYYTIKSEFYKNNNYKPITELEGKEVLTQNNFETYGIDDLNLLTKTIDTRVINGIDKGRLGSGKYFEVGL YNCCKRVKSQPVLDYTDNIMPQMNASTVNGITVTASSTEGNYYPYQAFDRNPSNAYAWSSNRYDSPEIRQSANLYINFNT LTRKVSKYKILSYYCYPYDIKLYGSNDNTDWKLLDERNNVVSEYKWYDFKFKNTINYQYYKFNFKTNEEKVFINEMELME LIIPFKYLIEYNSQLYTFNNTEIILSSSQVLDENNFINNGFVDATAITEEQWNTAFSDKSNLKLLIWTDDMSKTDVNIET ETIPFRPIDKLKKNSDICNILFKEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68222; Mature: 68222
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNSIFCYLDNSNGNDLNIGTTKDKAFKTIGKAKDFIKNNGGIGDVYIIGYYNIPSFELV CCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEE NNDIFLNIIGISKQSEIYYVHPFGDNVNCLKNVNFYKLKVSCGDSRFNYHPYTENVNFYN CCEEEEEEEEECCCCCEEEEEECCCCCHHEECCCEEEEEEEECCCCCCCCCCCCCCCEEE CIITFSGCPFYGYKSNFYNCIFENALTSIDYRFSDGNVYRIGGKFSNCIFNKNIFNEKTN EEEEECCCCCCCCCCCHHHHHHHHHHCEEEEEECCCCEEEECCCEEEEEECCCCCCCHHH FISAIKQSYNLSVDNIYFYINEKNKNDISIRNNGDINILNEDGTRSDIGIYGGMTPYIFN HHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCEEEECCCHHHHHH FYKFLLKQNQNYYTIKSEFYKNNNYKPITELEGKEVLTQNNFETYGIDDLNLLTKTIDTR HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHH VINGIDKGRLGSGKYFEVGLYNCCKRVKSQPVLDYTDNIMPQMNASTVNGITVTASSTEG HHCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCEEEEEECCCC NYYPYQAFDRNPSNAYAWSSNRYDSPEIRQSANLYINFNTLTRKVSKYKILSYYCYPYDI CCCCCEECCCCCCCCEEECCCCCCCHHHHCCCEEEEEEHHHHHHHHEEEEEEEEEEEEEE KLYGSNDNTDWKLLDERNNVVSEYKWYDFKFKNTINYQYYKFNFKTNEEKVFINEMELME EEEECCCCCCEEEEECCCCCCHHEEEEEEEECCEEEEEEEEEEEECCCCEEEEEHHHHHH LIIPFKYLIEYNSQLYTFNNTEIILSSSQVLDENNFINNGFVDATAITEEQWNTAFSDKS HHHHHHEEEEECCEEEEECCCEEEEECCCEECCCCCCCCCEEEEEEEEHHHCCCCCCCCC NLKLLIWTDDMSKTDVNIETETIPFRPIDKLKKNSDICNILFKEV CCEEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MDNSIFCYLDNSNGNDLNIGTTKDKAFKTIGKAKDFIKNNGGIGDVYIIGYYNIPSFELV CCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEE NNDIFLNIIGISKQSEIYYVHPFGDNVNCLKNVNFYKLKVSCGDSRFNYHPYTENVNFYN CCEEEEEEEEECCCCCEEEEEECCCCCHHEECCCEEEEEEEECCCCCCCCCCCCCCCEEE CIITFSGCPFYGYKSNFYNCIFENALTSIDYRFSDGNVYRIGGKFSNCIFNKNIFNEKTN EEEEECCCCCCCCCCCHHHHHHHHHHCEEEEEECCCCEEEECCCEEEEEECCCCCCCHHH FISAIKQSYNLSVDNIYFYINEKNKNDISIRNNGDINILNEDGTRSDIGIYGGMTPYIFN HHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCEEEECCCHHHHHH FYKFLLKQNQNYYTIKSEFYKNNNYKPITELEGKEVLTQNNFETYGIDDLNLLTKTIDTR HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHH VINGIDKGRLGSGKYFEVGLYNCCKRVKSQPVLDYTDNIMPQMNASTVNGITVTASSTEG HHCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCEEEEEECCCC NYYPYQAFDRNPSNAYAWSSNRYDSPEIRQSANLYINFNTLTRKVSKYKILSYYCYPYDI CCCCCEECCCCCCCCEEECCCCCCCHHHHCCCEEEEEEHHHHHHHHEEEEEEEEEEEEEE KLYGSNDNTDWKLLDERNNVVSEYKWYDFKFKNTINYQYYKFNFKTNEEKVFINEMELME EEEECCCCCCEEEEECCCCCCHHEEEEEEEECCEEEEEEEEEEEECCCCEEEEEHHHHHH LIIPFKYLIEYNSQLYTFNNTEIILSSSQVLDENNFINNGFVDATAITEEQWNTAFSDKS HHHHHHEEEEECCEEEEECCCEEEEECCCEECCCCCCCCCEEEEEEEEHHHCCCCCCCCC NLKLLIWTDDMSKTDVNIETETIPFRPIDKLKKNSDICNILFKEV CCEEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA