| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380970
Identifier: 148380970
GI number: 148380970
Start: 3211552
End: 3212892
Strand: Reverse
Name: 148380970
Synonym: CBO3021
Alternate gene names: NA
Gene position: 3212892-3211552 (Counterclockwise)
Preceding gene: 148380971
Following gene: 148380969
Centisome position: 82.66
GC content: 25.43
Gene sequence:
>1341_bases ATGGCTACAATAGGAGAACAATTATTACAAACTGAAAGTGGTTGGAAAAGATATGATGATACTGATAAAAACATCAGCTA CATCGGAAATGGATGGAAAACAGATCATGATTCTCATTATTCAAATACAGTAGGAGATAAAATATGTTTTAATTTTGTTG GAAGTAAAATAAGAATATTAGTATTTACGAATAATAGTCATTCAAAAGATGTTAAAATAAAAATAAATAATACTGTTTAT AGTTATGTGGAGTATATACATCCAATCACGCCTGCTTCACTAGTATTAATTTTTGAAAAAAAAATGACTAGTTTTAAAGA ATATAGTGTTGAGATCTATATCGAAAAACAAGATAACGAATATGGATGGTTTGATTTAGATGCAATAGACATAGATGAAA ATGGGATATTAAAACCTTATAATCCTAGTCTTAATAAATTTTTACTCAAACAAAATAACCAATATTATACAATAAAATAT GAATTCTATAAAAATAGTAATTATGAACCTATAGCAGATTTACAAGAAAAAGAAATATTAACTCAAACTGATTTTGAAAC TTACGGTATAGATGATTTGAATTTATTAACTAAAACTGTAGATACTCAAAATATTAATGGAACTGATAAAGGGAGGTTAG GGAATGGTAAGTTATTTGAGTTTGAGATGGATTCAAATTATAAAAGAATGATAAATCAGCCTAAATTTGATACAGAAGTA GAAGTAACAAACTCAGCTTGGCTAAATCAAGCCAAGTTTCCATTGGCGTCTGGTGGCATTTATCAATATTTTAATTTTGA GTTAAAAGAAGATTACTATAGTCGGTTTGATATAAATTTTACTTATACAGCAACAAGTCAATATATAATCTATTATACAG ATGGAACAAAAAATACTGTTTTTGGTGATAATAATGATATTTATAATTTTAAAAATAGTGTTTTAGATAAAACAAAACAA TGTAAAAGAATATCATTTAGATCCGATGTAAGTAGCGGAAGCTTTTTATCTTTTAAAATATTTAAAGAATATAAATTAAA ATTCTTAATTCAATATAAATCTCAGCTATATACATTTGATGGTACAAATATAGTCTTATCACCTTCACAAGAATTAGATG AAAATAATTTTATAAATAATGGCTTTATAGATGCGACAGCAATTGGAAAAGGACAATGGAATATTGCTTTTCCAGATAAG TCTAATCTTAAACTTCTAATGTGGACAGATGATATGAGTAAAACTGATGTCAGTTTAGAAACAGAGATAATTCCCTTTAG ACCAATAGATAAATTAAAGAAAAATAGTCATTTTTGTAATATATTATTTAATGAAGTATAA
Upstream 100 bases:
>100_bases ATAGAAACAGAAACAATTCCGTTTAGACCAATAGACAAATTAAAGAAAAATAGTGATATTTGTAATATATTATTTAAGGA AGTGTAGGAGGTGATATAAG
Downstream 100 bases:
>100_bases GAGGTGATATGAGATGGCTACAATAGGACAACAATTACTTCGACTTAAAAATGTGCAAGATAATAACTAATATAAAATAA TTTTGAAATAAATAAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Contains Cell Adhesion Domain Protein; Phage-Like Protein; Protein Containing Cell Adhesion Domain; Ig Group 2 Domain Protein; Cell Adhesion Domain Protein
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MATIGEQLLQTESGWKRYDDTDKNISYIGNGWKTDHDSHYSNTVGDKICFNFVGSKIRILVFTNNSHSKDVKIKINNTVY SYVEYIHPITPASLVLIFEKKMTSFKEYSVEIYIEKQDNEYGWFDLDAIDIDENGILKPYNPSLNKFLLKQNNQYYTIKY EFYKNSNYEPIADLQEKEILTQTDFETYGIDDLNLLTKTVDTQNINGTDKGRLGNGKLFEFEMDSNYKRMINQPKFDTEV EVTNSAWLNQAKFPLASGGIYQYFNFELKEDYYSRFDINFTYTATSQYIIYYTDGTKNTVFGDNNDIYNFKNSVLDKTKQ CKRISFRSDVSSGSFLSFKIFKEYKLKFLIQYKSQLYTFDGTNIVLSPSQELDENNFINNGFIDATAIGKGQWNIAFPDK SNLKLLMWTDDMSKTDVSLETEIIPFRPIDKLKKNSHFCNILFNEV
Sequences:
>Translated_446_residues MATIGEQLLQTESGWKRYDDTDKNISYIGNGWKTDHDSHYSNTVGDKICFNFVGSKIRILVFTNNSHSKDVKIKINNTVY SYVEYIHPITPASLVLIFEKKMTSFKEYSVEIYIEKQDNEYGWFDLDAIDIDENGILKPYNPSLNKFLLKQNNQYYTIKY EFYKNSNYEPIADLQEKEILTQTDFETYGIDDLNLLTKTVDTQNINGTDKGRLGNGKLFEFEMDSNYKRMINQPKFDTEV EVTNSAWLNQAKFPLASGGIYQYFNFELKEDYYSRFDINFTYTATSQYIIYYTDGTKNTVFGDNNDIYNFKNSVLDKTKQ CKRISFRSDVSSGSFLSFKIFKEYKLKFLIQYKSQLYTFDGTNIVLSPSQELDENNFINNGFIDATAIGKGQWNIAFPDK SNLKLLMWTDDMSKTDVSLETEIIPFRPIDKLKKNSHFCNILFNEV >Mature_445_residues ATIGEQLLQTESGWKRYDDTDKNISYIGNGWKTDHDSHYSNTVGDKICFNFVGSKIRILVFTNNSHSKDVKIKINNTVYS YVEYIHPITPASLVLIFEKKMTSFKEYSVEIYIEKQDNEYGWFDLDAIDIDENGILKPYNPSLNKFLLKQNNQYYTIKYE FYKNSNYEPIADLQEKEILTQTDFETYGIDDLNLLTKTVDTQNINGTDKGRLGNGKLFEFEMDSNYKRMINQPKFDTEVE VTNSAWLNQAKFPLASGGIYQYFNFELKEDYYSRFDINFTYTATSQYIIYYTDGTKNTVFGDNNDIYNFKNSVLDKTKQC KRISFRSDVSSGSFLSFKIFKEYKLKFLIQYKSQLYTFDGTNIVLSPSQELDENNFINNGFIDATAIGKGQWNIAFPDKS NLKLLMWTDDMSKTDVSLETEIIPFRPIDKLKKNSHFCNILFNEV
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52047; Mature: 51916
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIGEQLLQTESGWKRYDDTDKNISYIGNGWKTDHDSHYSNTVGDKICFNFVGSKIRIL CCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE VFTNNSHSKDVKIKINNTVYSYVEYIHPITPASLVLIFEKKMTSFKEYSVEIYIEKQDNE EEECCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEEEEHHHCCCEEEEEEEEEEECCCC YGWFDLDAIDIDENGILKPYNPSLNKFLLKQNNQYYTIKYEFYKNSNYEPIADLQEKEIL CCEEEEEEEEECCCCCCCCCCCCHHHHHEECCCCEEEEEEEEEECCCCCCCCCCHHHHHH TQTDFETYGIDDLNLLTKTVDTQNINGTDKGRLGNGKLFEFEMDSNYKRMINQPKFDTEV ECCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCEE EVTNSAWLNQAKFPLASGGIYQYFNFELKEDYYSRFDINFTYTATSQYIIYYTDGTKNTV EECCCHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCEEEEEEECCCCCEE FGDNNDIYNFKNSVLDKTKQCKRISFRSDVSSGSFLSFKIFKEYKLKFLIQYKSQLYTFD ECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCEEEEEEECCEEEEEC GTNIVLSPSQELDENNFINNGFIDATAIGKGQWNIAFPDKSNLKLLMWTDDMSKTDVSLE CCEEEECCCHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCEEE TEIIPFRPIDKLKKNSHFCNILFNEV EEEECCCCHHHHHCCCCEEEEEEECC >Mature Secondary Structure ATIGEQLLQTESGWKRYDDTDKNISYIGNGWKTDHDSHYSNTVGDKICFNFVGSKIRIL CCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE VFTNNSHSKDVKIKINNTVYSYVEYIHPITPASLVLIFEKKMTSFKEYSVEIYIEKQDNE EEECCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEEEEHHHCCCEEEEEEEEEEECCCC YGWFDLDAIDIDENGILKPYNPSLNKFLLKQNNQYYTIKYEFYKNSNYEPIADLQEKEIL CCEEEEEEEEECCCCCCCCCCCCHHHHHEECCCCEEEEEEEEEECCCCCCCCCCHHHHHH TQTDFETYGIDDLNLLTKTVDTQNINGTDKGRLGNGKLFEFEMDSNYKRMINQPKFDTEV ECCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCEE EVTNSAWLNQAKFPLASGGIYQYFNFELKEDYYSRFDINFTYTATSQYIIYYTDGTKNTV EECCCHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCEEEEEEECCCCCEE FGDNNDIYNFKNSVLDKTKQCKRISFRSDVSSGSFLSFKIFKEYKLKFLIQYKSQLYTFD ECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCEEEEEEECCEEEEEC GTNIVLSPSQELDENNFINNGFIDATAIGKGQWNIAFPDKSNLKLLMWTDDMSKTDVSLE CCEEEECCCHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCEEE TEIIPFRPIDKLKKNSHFCNILFNEV EEEECCCCHHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA