| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is hyuA [H]
Identifier: 148380842
GI number: 148380842
Start: 3073769
End: 3075163
Strand: Reverse
Name: hyuA [H]
Synonym: CBO2886
Alternate gene names: 148380842
Gene position: 3075163-3073769 (Counterclockwise)
Preceding gene: 148380843
Following gene: 148380841
Centisome position: 79.12
GC content: 29.39
Gene sequence:
>1395_bases ATGGCCACTTTAATAAAAAATGGAATTATTGTTACTTCAGGAGATACCTTTAAAGGAGATATTTATATAGAAAATGGTGT TATAGCTAAAATAGGTATAGGTTTGATTGAAGAGGCTAATGAAATCATTGATGCTAATGGGAAATATGTAATTCCTGGAG GGGTAGATGTTCATACTCACCTAAACTTAGATGTAGGAATAGCTGTGGCCACAGATGATTTTTATACTGGAACTGTAGCA GCTGCATGCGGTGGCACTACAAGTATAGTAGATCATTTAGCATTCGGACCTAAAGGATGTGATTTACACCATCAAATAAA TTTATATCATAATTATGCTAAGGGGAATGCAGTTATAGACTATGGGTTTCATGGTGTTATACAACATGTAAACGATAATA TATTACAAGAACTTGAAGAACTCTCCTATGAAGGAATAACAAGCAATAAAGTCTATTTAACTTATGATTATAAATTAAGT GATTTAGAAGTATTTAAAGTACTTATGAAATCTAAAGAAATTGGTATACTTACAGCTGTACATCCAGAAAATAATGATAT GGTTAACTATCTTAGAAAATATTATTCAAGCAATGGTTTTACATCTCCTATATATCATGCAAAAAGTAGACCAGTATGTT GTGAGGGAGAATCTATAAATAAAATGCTAAATATTGCTAATGTGGCAGGAGATTCTCCTCTGTACATAGTACATCTTTCC TGTAAATTAGGATTAGATTATATAAAAATGGCTATAGATAGAGGACAAAAAAATGTTTTTACAGAAACATGTCCTCAATA TCTTTTTTTAGATGAAAGCAAATATAATGGTAAAAATAATGAAGGATTAAAATATGTTATGAGTCCTCCCCTAAGAGAAA AATCTAATCAAGATGCTTTGTGGAAAGGAATTCAAGATGGATATATACAAGTTATTGCTACAGATCATTGTCCATTTAAC TTTAATATAGAAAAACAATTAGGGAAAGATGATTTTACTAAATGTCCAAGTGGATCACCTGGAATAGAAACTAGAATTCC TTTAATTTTTTCAGAGGGAGTTATGAAAAAAAGAATATCCTTAAATAAGTTTGTAGATTTAGTAAGTACAAAACCTGCAA AAATATTTGGATTATATCCCAAAAAAGGAACAATTGCAGTTGGTGCTGATGGAGATATTGTTATAATAGATCCTAATAAA AAAGTTAAAATTACTAAATCTATGTTACATGAAAATGTTGATTATACTCCTTATGAAGGATTTGAACTTCAGGGTTATCC AATAATGACAATCTCAAGAGGAAAGATTATAGCAAAAGATAATAAATTCATTGGAGAAAAAGGAGACGGCCAATTTTTAA AAAGAAAAAAGATAGATTTTTTTAATGTTAAATAA
Upstream 100 bases:
>100_bases GAAAATAGCTATAAAATAGAAGTAGCTGATAAAGAAACAAAAAATATATAAGTTTAAAATCATTTTTCACAATATTCACA AAAGGAGATGCGATTTTAAG
Downstream 100 bases:
>100_bases ATAATAATTTTGTGATTATAAAGAACTTTTTGTAGATTCAAAAGGTTCTTTTTTTCTTAATTTATCATAATGATAAGGTA TATTAATAAATTTGCAATTA
Product: phenylhydantoinase
Products: NA
Alternate protein names: Hydantoin-utilizing enzyme hyuA [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MATLIKNGIIVTSGDTFKGDIYIENGVIAKIGIGLIEEANEIIDANGKYVIPGGVDVHTHLNLDVGIAVATDDFYTGTVA AACGGTTSIVDHLAFGPKGCDLHHQINLYHNYAKGNAVIDYGFHGVIQHVNDNILQELEELSYEGITSNKVYLTYDYKLS DLEVFKVLMKSKEIGILTAVHPENNDMVNYLRKYYSSNGFTSPIYHAKSRPVCCEGESINKMLNIANVAGDSPLYIVHLS CKLGLDYIKMAIDRGQKNVFTETCPQYLFLDESKYNGKNNEGLKYVMSPPLREKSNQDALWKGIQDGYIQVIATDHCPFN FNIEKQLGKDDFTKCPSGSPGIETRIPLIFSEGVMKKRISLNKFVDLVSTKPAKIFGLYPKKGTIAVGADGDIVIIDPNK KVKITKSMLHENVDYTPYEGFELQGYPIMTISRGKIIAKDNKFIGEKGDGQFLKRKKIDFFNVK
Sequences:
>Translated_464_residues MATLIKNGIIVTSGDTFKGDIYIENGVIAKIGIGLIEEANEIIDANGKYVIPGGVDVHTHLNLDVGIAVATDDFYTGTVA AACGGTTSIVDHLAFGPKGCDLHHQINLYHNYAKGNAVIDYGFHGVIQHVNDNILQELEELSYEGITSNKVYLTYDYKLS DLEVFKVLMKSKEIGILTAVHPENNDMVNYLRKYYSSNGFTSPIYHAKSRPVCCEGESINKMLNIANVAGDSPLYIVHLS CKLGLDYIKMAIDRGQKNVFTETCPQYLFLDESKYNGKNNEGLKYVMSPPLREKSNQDALWKGIQDGYIQVIATDHCPFN FNIEKQLGKDDFTKCPSGSPGIETRIPLIFSEGVMKKRISLNKFVDLVSTKPAKIFGLYPKKGTIAVGADGDIVIIDPNK KVKITKSMLHENVDYTPYEGFELQGYPIMTISRGKIIAKDNKFIGEKGDGQFLKRKKIDFFNVK >Mature_463_residues ATLIKNGIIVTSGDTFKGDIYIENGVIAKIGIGLIEEANEIIDANGKYVIPGGVDVHTHLNLDVGIAVATDDFYTGTVAA ACGGTTSIVDHLAFGPKGCDLHHQINLYHNYAKGNAVIDYGFHGVIQHVNDNILQELEELSYEGITSNKVYLTYDYKLSD LEVFKVLMKSKEIGILTAVHPENNDMVNYLRKYYSSNGFTSPIYHAKSRPVCCEGESINKMLNIANVAGDSPLYIVHLSC KLGLDYIKMAIDRGQKNVFTETCPQYLFLDESKYNGKNNEGLKYVMSPPLREKSNQDALWKGIQDGYIQVIATDHCPFNF NIEKQLGKDDFTKCPSGSPGIETRIPLIFSEGVMKKRISLNKFVDLVSTKPAKIFGLYPKKGTIAVGADGDIVIIDPNKK VKITKSMLHENVDYTPYEGFELQGYPIMTISRGKIIAKDNKFIGEKGDGQFLKRKKIDFFNVK
Specific function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin derivatives with an aromatic side chains at the 5'-position. Has no activity on dihydropyrimidines. The physiological function is unknown [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503379, Length=457, Percent_Identity=36.7614879649891, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI4503375, Length=463, Percent_Identity=36.2850971922246, Blast_Score=279, Evalue=4e-75, Organism=Homo sapiens, GI4503051, Length=459, Percent_Identity=37.4727668845316, Blast_Score=278, Evalue=1e-74, Organism=Homo sapiens, GI4503377, Length=465, Percent_Identity=36.3440860215054, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI62422571, Length=459, Percent_Identity=37.4727668845316, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI190194363, Length=465, Percent_Identity=36.5591397849462, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI19923821, Length=455, Percent_Identity=35.3846153846154, Blast_Score=251, Evalue=7e-67, Organism=Homo sapiens, GI18105007, Length=407, Percent_Identity=24.8157248157248, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI87082175, Length=457, Percent_Identity=52.2975929978118, Blast_Score=508, Evalue=1e-145, Organism=Escherichia coli, GI1786722, Length=457, Percent_Identity=31.9474835886214, Blast_Score=186, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17539558, Length=460, Percent_Identity=36.5217391304348, Blast_Score=268, Evalue=6e-72, Organism=Caenorhabditis elegans, GI71989490, Length=458, Percent_Identity=34.2794759825328, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI86575075, Length=455, Percent_Identity=28.7912087912088, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI193204318, Length=408, Percent_Identity=25.7352941176471, Blast_Score=102, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6322218, Length=456, Percent_Identity=29.3859649122807, Blast_Score=130, Evalue=5e-31, Organism=Drosophila melanogaster, GI221377917, Length=459, Percent_Identity=35.0762527233115, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI17137462, Length=456, Percent_Identity=34.2105263157895, Blast_Score=239, Evalue=2e-63, Organism=Drosophila melanogaster, GI24644287, Length=308, Percent_Identity=33.4415584415584, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24644289, Length=229, Percent_Identity=34.4978165938865, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI24642586, Length=412, Percent_Identity=27.1844660194175, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI18859883, Length=256, Percent_Identity=23.828125, Blast_Score=90, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: 3.-.-.- [C]
Molecular weight: Translated: 51498; Mature: 51366
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLIKNGIIVTSGDTFKGDIYIENGVIAKIGIGLIEEANEIIDANGKYVIPGGVDVHTH CCCEEECCEEEECCCCEEEEEEEECCEEEEECCHHHHHHHHHCCCCCCEEECCCEEEEEE LNLDVGIAVATDDFYTGTVAAACGGTTSIVDHLAFGPKGCDLHHQINLYHNYAKGNAVID EEEEEEEEEEECCCCCCEEHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEE YGFHGVIQHVNDNILQELEELSYEGITSNKVYLTYDYKLSDLEVFKVLMKSKEIGILTAV ECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEECHHHHHHHHHCCCCCEEEEEE HPENNDMVNYLRKYYSSNGFTSPIYHAKSRPVCCEGESINKMLNIANVAGDSPLYIVHLS CCCCCHHHHHHHHHHCCCCCCCCCEECCCCCEEECCHHHHHHHHHHHCCCCCCEEEEEEE CKLGLDYIKMAIDRGQKNVFTETCPQYLFLDESKYNGKNNEGLKYVMSPPLREKSNQDAL ECCCHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHH WKGIQDGYIQVIATDHCPFNFNIEKQLGKDDFTKCPSGSPGIETRIPLIFSEGVMKKRIS HHCCCCCEEEEEEECCCCCCEEHHHHCCCCHHHCCCCCCCCCCEEEEEEECCCHHHHHHH LNKFVDLVSTKPAKIFGLYPKKGTIAVGADGDIVIIDPNKKVKITKSMLHENVDYTPYEG HHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCEEEEHHHHHCCCCCCCCCC FELQGYPIMTISRGKIIAKDNKFIGEKGDGQFLKRKKIDFFNVK EEECCEEEEEEECCEEEEECCCCCCCCCCCCHHHHCCCCEECCC >Mature Secondary Structure ATLIKNGIIVTSGDTFKGDIYIENGVIAKIGIGLIEEANEIIDANGKYVIPGGVDVHTH CCEEECCEEEECCCCEEEEEEEECCEEEEECCHHHHHHHHHCCCCCCEEECCCEEEEEE LNLDVGIAVATDDFYTGTVAAACGGTTSIVDHLAFGPKGCDLHHQINLYHNYAKGNAVID EEEEEEEEEEECCCCCCEEHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEE YGFHGVIQHVNDNILQELEELSYEGITSNKVYLTYDYKLSDLEVFKVLMKSKEIGILTAV ECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEECHHHHHHHHHCCCCCEEEEEE HPENNDMVNYLRKYYSSNGFTSPIYHAKSRPVCCEGESINKMLNIANVAGDSPLYIVHLS CCCCCHHHHHHHHHHCCCCCCCCCEECCCCCEEECCHHHHHHHHHHHCCCCCCEEEEEEE CKLGLDYIKMAIDRGQKNVFTETCPQYLFLDESKYNGKNNEGLKYVMSPPLREKSNQDAL ECCCHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHH WKGIQDGYIQVIATDHCPFNFNIEKQLGKDDFTKCPSGSPGIETRIPLIFSEGVMKKRIS HHCCCCCEEEEEEECCCCCCEEHHHHCCCCHHHCCCCCCCCCCEEEEEEECCCHHHHHHH LNKFVDLVSTKPAKIFGLYPKKGTIAVGADGDIVIIDPNKKVKITKSMLHENVDYTPYEG HHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCEEEEHHHHHCCCCCCCCCC FELQGYPIMTISRGKIIAKDNKFIGEKGDGQFLKRKKIDFFNVK EEECCEEEEEEECCEEEEECCCCCCCCCCCCHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA