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The map label for this gene is xtmA [H]

Identifier: 148380307

GI number: 148380307

Start: 2501735

End: 2502586

Strand: Reverse

Name: xtmA [H]

Synonym: CBO2356

Alternate gene names: 148380307

Gene position: 2502586-2501735 (Counterclockwise)

Preceding gene: 148380308

Following gene: 148380306

Centisome position: 64.38

GC content: 28.76

Gene sequence:

>852_bases
ATGGAAAGTATAAGAGGACCAGATATAAAAAAACAAGCAGAAAAATATTATATATCTGGGATGAAGTATAAAGACATAGC
ATCTAAGTATAATGTATCTATTAATACCGTTAAGAGTTGGAAACAAAGGTATAAATGGAATAGAAAAAGTATGCACACAA
AGAAAAAAGTATGCACACAAAAACAGAATAAAGAAAAAAGTGTACAGGAGCCAATGCAACAGGAAGAAAAGGAAGTTTTA
AATAACTCTGAACTTACTGATAAGCAAAGGCTCTTTTGTAGTTATTATATTAAATATAGAAATAAAACTAAGGCCTACAT
GAAAGCTTATCAATGTAGTTGGGAAAACGCGAATGCCCATGCATATGAACTGTGGGAAAACGTGGGAGTAAGAAATGAAA
TAGATAAGCAATTAAAAGAAATTAGAGATAACATAAAAATAGATATTCAAGATTTAATACAACTTAATATAGATATAGCT
TTTGCTGATATGAAGGACTATGTAACTTTTGGTAGGAAAGAAATAGAAATTGATAAGGATGAAGAGAATAATCCGGTAAT
GGTTAAAGTTAACTATGTAGACTTTAAGAATAGCAATGAAGTTGATGGAACACTTATAAGTGAGGTCAAACAGGGCAAAG
ATGGAGTATCAATTAAATTGCAGGATAAAATAAAAGCTATTGATTTTCTAAGAAAACACATTGAATTTCTTGATGAAGAT
ACTAAACACAAGCTTGATATTGAAAACAAGAAACTTCAAAATGAGAAACTTAAAGTAGATATAGAAAAAGTTAATGGTAA
TAAAAACATTAATTCAAAAGCAGTTCAGATAGTAGATGATATAGATGATTAA

Upstream 100 bases:

>100_bases
AAAAGAATAGAATTAGTTTATGATGATAATAGTACTAAAATAAAGAGCTCATAAGGGCTCTTTTTTATATACAAAACAAA
CAAAGCAACGAGGTGGTGGT

Downstream 100 bases:

>100_bases
AGTTAAATTAAAATCAATTATAGCAGAAAGCTTTTATGACGCTCATAGAGATATAAAAAAGAAACTTCATACGCATTATT
GGTTCAAAGGTGGAAGAGGA

Product: phage terminase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MESIRGPDIKKQAEKYYISGMKYKDIASKYNVSINTVKSWKQRYKWNRKSMHTKKKVCTQKQNKEKSVQEPMQQEEKEVL
NNSELTDKQRLFCSYYIKYRNKTKAYMKAYQCSWENANAHAYELWENVGVRNEIDKQLKEIRDNIKIDIQDLIQLNIDIA
FADMKDYVTFGRKEIEIDKDEENNPVMVKVNYVDFKNSNEVDGTLISEVKQGKDGVSIKLQDKIKAIDFLRKHIEFLDED
TKHKLDIENKKLQNEKLKVDIEKVNGNKNINSKAVQIVDDIDD

Sequences:

>Translated_283_residues
MESIRGPDIKKQAEKYYISGMKYKDIASKYNVSINTVKSWKQRYKWNRKSMHTKKKVCTQKQNKEKSVQEPMQQEEKEVL
NNSELTDKQRLFCSYYIKYRNKTKAYMKAYQCSWENANAHAYELWENVGVRNEIDKQLKEIRDNIKIDIQDLIQLNIDIA
FADMKDYVTFGRKEIEIDKDEENNPVMVKVNYVDFKNSNEVDGTLISEVKQGKDGVSIKLQDKIKAIDFLRKHIEFLDED
TKHKLDIENKKLQNEKLKVDIEKVNGNKNINSKAVQIVDDIDD
>Mature_283_residues
MESIRGPDIKKQAEKYYISGMKYKDIASKYNVSINTVKSWKQRYKWNRKSMHTKKKVCTQKQNKEKSVQEPMQQEEKEVL
NNSELTDKQRLFCSYYIKYRNKTKAYMKAYQCSWENANAHAYELWENVGVRNEIDKQLKEIRDNIKIDIQDLIQLNIDIA
FADMKDYVTFGRKEIEIDKDEENNPVMVKVNYVDFKNSNEVDGTLISEVKQGKDGVSIKLQDKIKAIDFLRKHIEFLDED
TKHKLDIENKKLQNEKLKVDIEKVNGNKNINSKAVQIVDDIDD

Specific function: Functions as a terminase [H]

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaS and B.subtilis phage SPP1 terminase small subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925
- InterPro:   IPR005335 [H]

Pfam domain/function: PF10668 Phage_terminase; PF03592 Terminase_2 [H]

EC number: NA

Molecular weight: Translated: 33449; Mature: 33449

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESIRGPDIKKQAEKYYISGMKYKDIASKYNVSINTVKSWKQRYKWNRKSMHTKKKVCTQ
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
KQNKEKSVQEPMQQEEKEVLNNSELTDKQRLFCSYYIKYRNKTKAYMKAYQCSWENANAH
HCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCH
AYELWENVGVRNEIDKQLKEIRDNIKIDIQDLIQLNIDIAFADMKDYVTFGRKEIEIDKD
HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHEECEEEEECHHHHHHCCCEEEEECCC
EENNPVMVKVNYVDFKNSNEVDGTLISEVKQGKDGVSIKLQDKIKAIDFLRKHIEFLDED
CCCCCEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCC
TKHKLDIENKKLQNEKLKVDIEKVNGNKNINSKAVQIVDDIDD
CCCCCCCCHHHHCCCCEEEEEEEECCCCCCCHHHEEEECCCCC
>Mature Secondary Structure
MESIRGPDIKKQAEKYYISGMKYKDIASKYNVSINTVKSWKQRYKWNRKSMHTKKKVCTQ
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
KQNKEKSVQEPMQQEEKEVLNNSELTDKQRLFCSYYIKYRNKTKAYMKAYQCSWENANAH
HCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCH
AYELWENVGVRNEIDKQLKEIRDNIKIDIQDLIQLNIDIAFADMKDYVTFGRKEIEIDKD
HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHEECEEEEECHHHHHHCCCEEEEECCC
EENNPVMVKVNYVDFKNSNEVDGTLISEVKQGKDGVSIKLQDKIKAIDFLRKHIEFLDED
CCCCCEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCC
TKHKLDIENKKLQNEKLKVDIEKVNGNKNINSKAVQIVDDIDD
CCCCCCCCHHHHCCCCEEEEEEEECCCCCCCHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377 [H]