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The map label for this gene is xtmB [H]

Identifier: 148380306

GI number: 148380306

Start: 2500396

End: 2501742

Strand: Reverse

Name: xtmB [H]

Synonym: CBO2355

Alternate gene names: 148380306

Gene position: 2501742-2500396 (Counterclockwise)

Preceding gene: 148380307

Following gene: 148380305

Centisome position: 64.36

GC content: 29.77

Gene sequence:

>1347_bases
ATGATTAAAGTTAAATTAAAATCAATTATAGCAGAAAGCTTTTATGACGCTCATAGAGATATAAAAAAGAAACTTCATAC
GCATTATTGGTTCAAAGGTGGAAGAGGAAGTACGAAGTCTTCTTTTATTTCTATAGAAATTGTACTAGGAATAATGAGAG
ATGCTCAAGAAGAAATTTATTCTAATGGACTGGTAATAAGACGAGTTAAAGAAACATTAAGAGAATCAGTTTATGATCAA
ATTAAATGGGCCATTTATATGTTAGGTGTAGAAGATGAATGGGATATGCCAGAAAGTAAATTAAGAATAACTTATAAACC
AACTGGTCAGGCAATATTATTTAGAGGTGCAGATAAAGTCAAAAAATTAAAGTCTACAAAGGTATCAAAAGGTTGGATTA
AATATATATGGTATGAAGAAGCAGATGAATTTGAAAATTATGATAAGATACGTAATGTTAATCAATCTCTTATGAGGGGT
GGACCAGAGTTTGAGGTGTTTTATTCTTTTAATCCACCAGAAAGTCAAAGGAATTGGACTAATATGGAGGTATTAGAGGA
AAGAAAAGATAAGTTTGTACATCATTCAACATATCTAACAGTACCTAAAGAATGGCTAGGAGAACAGTTTGTAATTGAAG
CTGAACATCTTAAAAAGGTTAATAAAACTAAGTATGACCATGATTATCTAGGTGCAGTAACTGGAACTGGTGGGGAAGTA
TTTAGAAATGTAACTGTTAGAAATATAACTGATGATGAGATAAAAGTATTTGACCATGTTAAAAATGGATTAGATTTTGG
ATATGCTGCAGATCCATTAGCTTATATAAAATGTCATTATGATAAAACAAGAAAGAGGCTTTATATATTTGATGAAATAG
TAAAAGTTCAATTAGGAAATAGTAAAGCAGTTAAACTTATTAAAGAGAAAAATAAATTAAATATGAGAGTAACAGCAGAT
AGTGCAGAACCTAGAACAATAAGTGAGTTTAGAAAATTAGGATTAAACATTATAGGAGCAATAAAAGGTCCTGATAGTGT
TGAACATGGAATAAAGTTCTTAAGTGAAGAAATAGAAGAAATAATTATTGACCCAATTCGTTGTCCAAATGCTAAAAGAG
AATTCTTAGGGTATGAGCTTGAAAAAGATAAAGATGGAAACTTTAAAGGAGAATATCCGGATAAGAATAACCATACTATT
GATGCTACTAGATATGCACTTGAAAGAGATATTTTAAGATTTAATGAAGAAAAGAAATATAATGATAAAGTTTATAAAAA
AGGAAAAGGTGTTGTTAAGAAGACAACTACTGATCCATATGGAAGGAAAGGAGGTACAGTGTTCTGA

Upstream 100 bases:

>100_bases
AACAAGAAACTTCAAAATGAGAAACTTAAAGTAGATATAGAAAAAGTTAATGGTAATAAAAACATTAATTCAAAAGCAGT
TCAGATAGTAGATGATATAG

Downstream 100 bases:

>100_bases
TGGAAAAACAAGCAAGAACAATAAGAGATACATTATTAAAGTTGCCAGATAATGAAATAGCTGAAAGGAAACGTGTATTT
GCTGATTACTATTATTACAA

Product: terminase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MIKVKLKSIIAESFYDAHRDIKKKLHTHYWFKGGRGSTKSSFISIEIVLGIMRDAQEEIYSNGLVIRRVKETLRESVYDQ
IKWAIYMLGVEDEWDMPESKLRITYKPTGQAILFRGADKVKKLKSTKVSKGWIKYIWYEEADEFENYDKIRNVNQSLMRG
GPEFEVFYSFNPPESQRNWTNMEVLEERKDKFVHHSTYLTVPKEWLGEQFVIEAEHLKKVNKTKYDHDYLGAVTGTGGEV
FRNVTVRNITDDEIKVFDHVKNGLDFGYAADPLAYIKCHYDKTRKRLYIFDEIVKVQLGNSKAVKLIKEKNKLNMRVTAD
SAEPRTISEFRKLGLNIIGAIKGPDSVEHGIKFLSEEIEEIIIDPIRCPNAKREFLGYELEKDKDGNFKGEYPDKNNHTI
DATRYALERDILRFNEEKKYNDKVYKKGKGVVKKTTTDPYGRKGGTVF

Sequences:

>Translated_448_residues
MIKVKLKSIIAESFYDAHRDIKKKLHTHYWFKGGRGSTKSSFISIEIVLGIMRDAQEEIYSNGLVIRRVKETLRESVYDQ
IKWAIYMLGVEDEWDMPESKLRITYKPTGQAILFRGADKVKKLKSTKVSKGWIKYIWYEEADEFENYDKIRNVNQSLMRG
GPEFEVFYSFNPPESQRNWTNMEVLEERKDKFVHHSTYLTVPKEWLGEQFVIEAEHLKKVNKTKYDHDYLGAVTGTGGEV
FRNVTVRNITDDEIKVFDHVKNGLDFGYAADPLAYIKCHYDKTRKRLYIFDEIVKVQLGNSKAVKLIKEKNKLNMRVTAD
SAEPRTISEFRKLGLNIIGAIKGPDSVEHGIKFLSEEIEEIIIDPIRCPNAKREFLGYELEKDKDGNFKGEYPDKNNHTI
DATRYALERDILRFNEEKKYNDKVYKKGKGVVKKTTTDPYGRKGGTVF
>Mature_448_residues
MIKVKLKSIIAESFYDAHRDIKKKLHTHYWFKGGRGSTKSSFISIEIVLGIMRDAQEEIYSNGLVIRRVKETLRESVYDQ
IKWAIYMLGVEDEWDMPESKLRITYKPTGQAILFRGADKVKKLKSTKVSKGWIKYIWYEEADEFENYDKIRNVNQSLMRG
GPEFEVFYSFNPPESQRNWTNMEVLEERKDKFVHHSTYLTVPKEWLGEQFVIEAEHLKKVNKTKYDHDYLGAVTGTGGEV
FRNVTVRNITDDEIKVFDHVKNGLDFGYAADPLAYIKCHYDKTRKRLYIFDEIVKVQLGNSKAVKLIKEKNKLNMRVTAD
SAEPRTISEFRKLGLNIIGAIKGPDSVEHGIKFLSEEIEEIIIDPIRCPNAKREFLGYELEKDKDGNFKGEYPDKNNHTI
DATRYALERDILRFNEEKKYNDKVYKKGKGVVKKTTTDPYGRKGGTVF

Specific function: Functions as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaT and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 52195; Mature: 52195

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVKLKSIIAESFYDAHRDIKKKLHTHYWFKGGRGSTKSSFISIEIVLGIMRDAQEEIY
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEHHHHHHHHHHHHHHHH
SNGLVIRRVKETLRESVYDQIKWAIYMLGVEDEWDMPESKLRITYKPTGQAILFRGADKV
HCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECHHHH
KKLKSTKVSKGWIKYIWYEEADEFENYDKIRNVNQSLMRGGPEFEVFYSFNPPESQRNWT
HHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
NMEVLEERKDKFVHHSTYLTVPKEWLGEQFVIEAEHLKKVNKTKYDHDYLGAVTGTGGEV
HHHHHHHHHHHHEECCEEEECCHHHCCCEEEEEHHHHHHHHCCCCCCHHCCEEECCCHHH
FRNVTVRNITDDEIKVFDHVKNGLDFGYAADPLAYIKCHYDKTRKRLYIFDEIVKVQLGN
HHCCEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHCCCEEEEEEHHHHEECCC
SKAVKLIKEKNKLNMRVTADSAEPRTISEFRKLGLNIIGAIKGPDSVEHGIKFLSEEIEE
HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
IIIDPIRCPNAKREFLGYELEKDKDGNFKGEYPDKNNHTIDATRYALERDILRFNEEKKY
HHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHH
NDKVYKKGKGVVKKTTTDPYGRKGGTVF
HHHHHHCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MIKVKLKSIIAESFYDAHRDIKKKLHTHYWFKGGRGSTKSSFISIEIVLGIMRDAQEEIY
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEHHHHHHHHHHHHHHHH
SNGLVIRRVKETLRESVYDQIKWAIYMLGVEDEWDMPESKLRITYKPTGQAILFRGADKV
HCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECHHHH
KKLKSTKVSKGWIKYIWYEEADEFENYDKIRNVNQSLMRGGPEFEVFYSFNPPESQRNWT
HHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
NMEVLEERKDKFVHHSTYLTVPKEWLGEQFVIEAEHLKKVNKTKYDHDYLGAVTGTGGEV
HHHHHHHHHHHHEECCEEEECCHHHCCCEEEEEHHHHHHHHCCCCCCHHCCEEECCCHHH
FRNVTVRNITDDEIKVFDHVKNGLDFGYAADPLAYIKCHYDKTRKRLYIFDEIVKVQLGN
HHCCEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHCCCEEEEEEHHHHEECCC
SKAVKLIKEKNKLNMRVTADSAEPRTISEFRKLGLNIIGAIKGPDSVEHGIKFLSEEIEE
HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
IIIDPIRCPNAKREFLGYELEKDKDGNFKGEYPDKNNHTIDATRYALERDILRFNEEKKY
HHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHH
NDKVYKKGKGVVKKTTTDPYGRKGGTVF
HHHHHHCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 8083174 [H]