Click here to switch to the map view.

The map label for this gene is yqbK [H]

Identifier: 148379692

GI number: 148379692

Start: 1848689

End: 1849999

Strand: Direct

Name: yqbK [H]

Synonym: CBO1733

Alternate gene names: 148379692

Gene position: 1848689-1849999 (Clockwise)

Preceding gene: 148379691

Following gene: 148379693

Centisome position: 47.56

GC content: 31.35

Gene sequence:

>1311_bases
ATGGCTGGTGGAACTTGGGAAAGACAAAATAAAATTAGACCAGGGGCTTATATAAATTTTAAGTCTAAAAAGCAAGGGCA
AACGCCAATAGGAGAAAGAGGAATTGCAACTCTACCATTAGAGCTACCATGGGGACCTGAAAAAGAAATTATTACTATAC
ATGCTGATGATGATTTATCTAAAGTACTAGGTATAAATATAGCTGATGAAAGTGCATTACTTATTAGAGAAGTATTAAAA
AAAGCTAAGACACTTTTATTATATAGACTTAATGAAGGGACTAAGGCAACTGCTACATTAGAAGGATTAACTATAAATGC
TAAATATACTGGAACAAAAGGAAATAATATTACTATAGTAATTCAAAACAGTATAGATTTTGTAGGAAGCTTTGAAGTTA
TAACTATGTTTGAGGGTAATAAAGTAGATAAACAATTAGTTAAAGTTATAGAAGATTTGAAGCCTAATGATTATGTTGAT
TTCAAAGGTGCTGGAGAATTAAAAACCTCCGCTGGATTACCACTTAAGGATGGGTCTGATGGTACTGTTACCAATCAAGG
ATATACTGATTATTTATCAGTTATAGAACCTTATGAATTTCATGCTATAGGTATTCCAACTAAAGATCCTACTATAAAAG
CAGTAGCGACTACATTTATAAAGAGACTTAAAGAAGATGGTAGACAGGTACAGTTGATACTAGAAAATTATCCCGAAGCT
GATAGTGAAAATGTTATTACTGTTAGAAACGGTGTTATTTTAGCTGATAATACAGTAATAAAATCCAATCAAGCAGTTGC
ATTTGTAACTGGAGCTACTGCTGGAGCAAATGTAAATCAATCAAATACTTACTTAGAATATCCAGGAGCTATTGATGTAG
ATACTAAATACACCAACAGGGAAATAGAAGAAGCTTTATTAAACGGAGAAATAGTCTTTACTATTAGCAATAGAAAAGTA
GTAATAGAACAGGATATTAATACATTTAAATCTTTTACAGAAGACAAAGGAAAAGATTATAGAAAAAATAGAGTAGTTCG
CACACTTTTTGAAGTAAATAATGGAAGTAGATTATTATGGGAAACTAATTATATTGGTAAAGGTAATAATAGCGAAGATG
GAAGAAATTTATATAAAAAGGATGTAATTAAGTTCTTAGAAAAATTACAGGGAATCGGAGCACTTGAGAATGTTGTTCCA
GAAGATGTTGAAATTAAAAGAGGACAAGATAAAGATTCTGTAGTAGCTAGAATGGGAGTACAACCAATAGATGCTATGGA
AAAGCTATATATGGATGTGGAGGTGGAATAG

Upstream 100 bases:

>100_bases
GAAATAGATGTACTTAAAGCTTTATTAAAAGATGAACAGTATAGCTTAAAAGAAGTAAATAAAGTCTTAGAAGATTTTAA
TAAGAAAGAGGTGAAATAGT

Downstream 100 bases:

>100_bases
TAAATGGGATTTCTTAAAGCGGGAGATACAATAAGTGGACAAGAAGCTAGAGGATTTATAACTATAGATGGTAGAAATGA
AGAACTATTCTATGCTAAAA

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MAGGTWERQNKIRPGAYINFKSKKQGQTPIGERGIATLPLELPWGPEKEIITIHADDDLSKVLGINIADESALLIREVLK
KAKTLLLYRLNEGTKATATLEGLTINAKYTGTKGNNITIVIQNSIDFVGSFEVITMFEGNKVDKQLVKVIEDLKPNDYVD
FKGAGELKTSAGLPLKDGSDGTVTNQGYTDYLSVIEPYEFHAIGIPTKDPTIKAVATTFIKRLKEDGRQVQLILENYPEA
DSENVITVRNGVILADNTVIKSNQAVAFVTGATAGANVNQSNTYLEYPGAIDVDTKYTNREIEEALLNGEIVFTISNRKV
VIEQDINTFKSFTEDKGKDYRKNRVVRTLFEVNNGSRLLWETNYIGKGNNSEDGRNLYKKDVIKFLEKLQGIGALENVVP
EDVEIKRGQDKDSVVARMGVQPIDAMEKLYMDVEVE

Sequences:

>Translated_436_residues
MAGGTWERQNKIRPGAYINFKSKKQGQTPIGERGIATLPLELPWGPEKEIITIHADDDLSKVLGINIADESALLIREVLK
KAKTLLLYRLNEGTKATATLEGLTINAKYTGTKGNNITIVIQNSIDFVGSFEVITMFEGNKVDKQLVKVIEDLKPNDYVD
FKGAGELKTSAGLPLKDGSDGTVTNQGYTDYLSVIEPYEFHAIGIPTKDPTIKAVATTFIKRLKEDGRQVQLILENYPEA
DSENVITVRNGVILADNTVIKSNQAVAFVTGATAGANVNQSNTYLEYPGAIDVDTKYTNREIEEALLNGEIVFTISNRKV
VIEQDINTFKSFTEDKGKDYRKNRVVRTLFEVNNGSRLLWETNYIGKGNNSEDGRNLYKKDVIKFLEKLQGIGALENVVP
EDVEIKRGQDKDSVVARMGVQPIDAMEKLYMDVEVE
>Mature_435_residues
AGGTWERQNKIRPGAYINFKSKKQGQTPIGERGIATLPLELPWGPEKEIITIHADDDLSKVLGINIADESALLIREVLKK
AKTLLLYRLNEGTKATATLEGLTINAKYTGTKGNNITIVIQNSIDFVGSFEVITMFEGNKVDKQLVKVIEDLKPNDYVDF
KGAGELKTSAGLPLKDGSDGTVTNQGYTDYLSVIEPYEFHAIGIPTKDPTIKAVATTFIKRLKEDGRQVQLILENYPEAD
SENVITVRNGVILADNTVIKSNQAVAFVTGATAGANVNQSNTYLEYPGAIDVDTKYTNREIEEALLNGEIVFTISNRKVV
IEQDINTFKSFTEDKGKDYRKNRVVRTLFEVNNGSRLLWETNYIGKGNNSEDGRNLYKKDVIKFLEKLQGIGALENVVPE
DVEIKRGQDKDSVVARMGVQPIDAMEKLYMDVEVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xkdK [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020287
- InterPro:   IPR007067
- ProDom:   PD032508 [H]

Pfam domain/function: PF04984 Phage_sheath_1 [H]

EC number: NA

Molecular weight: Translated: 48374; Mature: 48243

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGTWERQNKIRPGAYINFKSKKQGQTPIGERGIATLPLELPWGPEKEIITIHADDDLS
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHH
KVLGINIADESALLIREVLKKAKTLLLYRLNEGTKATATLEGLTINAKYTGTKGNNITIV
HHHCCEECCCHHHHHHHHHHHHHEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCEEEEE
IQNSIDFVGSFEVITMFEGNKVDKQLVKVIEDLKPNDYVDFKGAGELKTSAGLPLKDGSD
EECCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCC
GTVTNQGYTDYLSVIEPYEFHAIGIPTKDPTIKAVATTFIKRLKEDGRQVQLILENYPEA
CCEECCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
DSENVITVRNGVILADNTVIKSNQAVAFVTGATAGANVNQSNTYLEYPGAIDVDTKYTNR
CCCCEEEEECCEEEECCEEEECCCEEEEEECCCCCCCCCCCCCEEECCCEEECCCCCCCH
EIEEALLNGEIVFTISNRKVVIEQDINTFKSFTEDKGKDYRKNRVVRTLFEVNNGSRLLW
HHHHHHHCCEEEEEECCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCEEEE
ETNYIGKGNNSEDGRNLYKKDVIKFLEKLQGIGALENVVPEDVEIKRGQDKDSVVARMGV
EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEECCCCCHHHHHHHCCC
QPIDAMEKLYMDVEVE
CCHHHHHHHHEEEEEC
>Mature Secondary Structure 
AGGTWERQNKIRPGAYINFKSKKQGQTPIGERGIATLPLELPWGPEKEIITIHADDDLS
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHH
KVLGINIADESALLIREVLKKAKTLLLYRLNEGTKATATLEGLTINAKYTGTKGNNITIV
HHHCCEECCCHHHHHHHHHHHHHEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCEEEEE
IQNSIDFVGSFEVITMFEGNKVDKQLVKVIEDLKPNDYVDFKGAGELKTSAGLPLKDGSD
EECCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCC
GTVTNQGYTDYLSVIEPYEFHAIGIPTKDPTIKAVATTFIKRLKEDGRQVQLILENYPEA
CCEECCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
DSENVITVRNGVILADNTVIKSNQAVAFVTGATAGANVNQSNTYLEYPGAIDVDTKYTNR
CCCCEEEEECCEEEECCEEEECCCEEEEEECCCCCCCCCCCCCEEECCCEEECCCCCCCH
EIEEALLNGEIVFTISNRKVVIEQDINTFKSFTEDKGKDYRKNRVVRTLFEVNNGSRLLW
HHHHHHHCCEEEEEECCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCEEEE
ETNYIGKGNNSEDGRNLYKKDVIKFLEKLQGIGALENVVPEDVEIKRGQDKDSVVARMGV
EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEECCCCCHHHHHHHCCC
QPIDAMEKLYMDVEVE
CCHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]