Definition Clostridium botulinum A str. ATCC 3502, complete genome.
Accession NC_009495
Length 3,886,916

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The map label for this gene is xkdM [H]

Identifier: 148379693

GI number: 148379693

Start: 1850003

End: 1850467

Strand: Direct

Name: xkdM [H]

Synonym: CBO1734

Alternate gene names: 148379693

Gene position: 1850003-1850467 (Clockwise)

Preceding gene: 148379692

Following gene: 148379694

Centisome position: 47.6

GC content: 31.83

Gene sequence:

>465_bases
ATGGGATTTCTTAAAGCGGGAGATACAATAAGTGGACAAGAAGCTAGAGGATTTATAACTATAGATGGTAGAAATGAAGA
ACTATTCTATGCTAAAAAATTAGAATCAAAAGTAGAAAAGAAAAAAACAGAGGTAAGAACTTTGAGTAAAAGAGGAGAAC
AACATAAAGCTGCTGGTTGGAGTGGCTCTGGTACATTAACAGTATATTATGTGACTTCTTTGTTCAGAGAATTAATGATT
AAGTATATTAAAACTGGAGTAGACACTTATTTTGATATAACTGTTACAAATGAAGATCCAACAAGTAGCATAGGGAAACA
AACTACAGTTTTAAAAGATTGTAATTTAGATGAAGTTTCTATGGCAATGTTTGATGTAGAATCCGAGGTGCTTGAAGAAG
ATATGGGATTTACGTTTGATGATGTGGACTTATTAGATAAATTTGGAAAGCCAGTATTAGGTTAA

Upstream 100 bases:

>100_bases
TAAAAGAGGACAAGATAAAGATTCTGTAGTAGCTAGAATGGGAGTACAACCAATAGATGCTATGGAAAAGCTATATATGG
ATGTGGAGGTGGAATAGTAA

Downstream 100 bases:

>100_bases
TAGGAGGAGTATATTAATGAATAATTTTGAAGATTTTTTAATGGATAGCTTTGAGGAAGTAGAAGAAATAGAAAGAGAAA
TAACTATAGGTGGTAAAAAG

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MGFLKAGDTISGQEARGFITIDGRNEELFYAKKLESKVEKKKTEVRTLSKRGEQHKAAGWSGSGTLTVYYVTSLFRELMI
KYIKTGVDTYFDITVTNEDPTSSIGKQTTVLKDCNLDEVSMAMFDVESEVLEEDMGFTFDDVDLLDKFGKPVLG

Sequences:

>Translated_154_residues
MGFLKAGDTISGQEARGFITIDGRNEELFYAKKLESKVEKKKTEVRTLSKRGEQHKAAGWSGSGTLTVYYVTSLFRELMI
KYIKTGVDTYFDITVTNEDPTSSIGKQTTVLKDCNLDEVSMAMFDVESEVLEEDMGFTFDDVDLLDKFGKPVLG
>Mature_153_residues
GFLKAGDTISGQEARGFITIDGRNEELFYAKKLESKVEKKKTEVRTLSKRGEQHKAAGWSGSGTLTVYYVTSLFRELMIK
YIKTGVDTYFDITVTNEDPTSSIGKQTTVLKDCNLDEVSMAMFDVESEVLEEDMGFTFDDVDLLDKFGKPVLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqbM [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018989 [H]

Pfam domain/function: PF09393 DUF2001 [H]

EC number: NA

Molecular weight: Translated: 17235; Mature: 17103

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLKAGDTISGQEARGFITIDGRNEELFYAKKLESKVEKKKTEVRTLSKRGEQHKAAGW
CCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
SGSGTLTVYYVTSLFRELMIKYIKTGVDTYFDITVTNEDPTSSIGKQTTVLKDCNLDEVS
CCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHCCCCCEEEECCCCCHHH
MAMFDVESEVLEEDMGFTFDDVDLLDKFGKPVLG
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
GFLKAGDTISGQEARGFITIDGRNEELFYAKKLESKVEKKKTEVRTLSKRGEQHKAAGW
CCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
SGSGTLTVYYVTSLFRELMIKYIKTGVDTYFDITVTNEDPTSSIGKQTTVLKDCNLDEVS
CCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHCCCCCEEEECCCCCHHH
MAMFDVESEVLEEDMGFTFDDVDLLDKFGKPVLG
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]