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The map label for this gene is 148378329

Identifier: 148378329

GI number: 148378329

Start: 380726

End: 381133

Strand: Direct

Name: 148378329

Synonym: CBO0327

Alternate gene names: NA

Gene position: 380726-381133 (Clockwise)

Preceding gene: 148378328

Following gene: 148378330

Centisome position: 9.8

GC content: 27.7

Gene sequence:

>408_bases
TTGGAGTATATTACAGCAAAAACTTTGATATCAAATTATAGTGAGAATAATTGGTGGTTTGGAATAAATTATAATATGAA
TATTTATAAAGGTTGTTGTCATGGCTGTATTTATTGTGATTCTAGAAGCGAATGTTATGGTATAGAGAACTTTGATAAAG
TAAGAGCAAAGAAAAATGCAATACAGATTATTAAAAATGAATTAAGAAAAAAAAGAAAAAAAGGAGTTATAGGAACTGGA
GCCATGAGTGATCCTTATAATCATTTGGAAAGAGAATTGATGCTTACAAGAATGGCATTAGAAGAAATAAATACTCTCAA
TTTTGGAGCAGCGATAGCAACTAAAAGTAATCTTATAGTACGAGATATTGATATTTTAAAAAAATTAAGACTTATTCACC
TACACTAG

Upstream 100 bases:

>100_bases
TGATAAAGATTTATTTAATATGACATACAGATGTCACATATGATTTGGTACTATGAATACAAATAATTACTTAGAAATTT
ATTAAGGAGTGATAATGAAC

Downstream 100 bases:

>100_bases
TAAAAATTACAATAACTACCTATGATGATGAATTGTGCAAAAAAGTTGAACCTAATGTTTGTGTAACATCTAAAAGATTT
CAAGCTATAAAAGAACTTTC

Product: radical SAM superfamily protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; DNA Repair Photolyase; Radical SAM Superfamily Protein; Elongator /MiaB/NifB; Radical SAM; Radical SAM-Superfamily Protein; Radical Sam Domain Protein; Radical SAM Protein Elongator /MiaB/NifB ; Elongator; Nitrogenase Cofactor Biosynthesis Protein NifB; DNA Repair PhotolyaB; Radical SAM Domain Protein Protein; Radical SAM Superfamily

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MEYITAKTLISNYSENNWWFGINYNMNIYKGCCHGCIYCDSRSECYGIENFDKVRAKKNAIQIIKNELRKKRKKGVIGTG
AMSDPYNHLERELMLTRMALEEINTLNFGAAIATKSNLIVRDIDILKKLRLIHLH

Sequences:

>Translated_135_residues
MEYITAKTLISNYSENNWWFGINYNMNIYKGCCHGCIYCDSRSECYGIENFDKVRAKKNAIQIIKNELRKKRKKGVIGTG
AMSDPYNHLERELMLTRMALEEINTLNFGAAIATKSNLIVRDIDILKKLRLIHLH
>Mature_135_residues
MEYITAKTLISNYSENNWWFGINYNMNIYKGCCHGCIYCDSRSECYGIENFDKVRAKKNAIQIIKNELRKKRKKGVIGTG
AMSDPYNHLERELMLTRMALEEINTLNFGAAIATKSNLIVRDIDILKKLRLIHLH

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15677; Mature: 15677

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYITAKTLISNYSENNWWFGINYNMNIYKGCCHGCIYCDSRSECYGIENFDKVRAKKNA
CCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHH
IQIIKNELRKKRKKGVIGTGAMSDPYNHLERELMLTRMALEEINTLNFGAAIATKSNLIV
HHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEE
RDIDILKKLRLIHLH
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MEYITAKTLISNYSENNWWFGINYNMNIYKGCCHGCIYCDSRSECYGIENFDKVRAKKNA
CCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHH
IQIIKNELRKKRKKGVIGTGAMSDPYNHLERELMLTRMALEEINTLNFGAAIATKSNLIV
HHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEE
RDIDILKKLRLIHLH
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA