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The map label for this gene is 148378330

Identifier: 148378330

GI number: 148378330

Start: 381166

End: 381618

Strand: Direct

Name: 148378330

Synonym: CBO0328

Alternate gene names: NA

Gene position: 381166-381618 (Clockwise)

Preceding gene: 148378329

Following gene: 148378331

Centisome position: 9.81

GC content: 25.83

Gene sequence:

>453_bases
TTGTGCAAAAAAGTTGAACCTAATGTTTGTGTAACATCTAAAAGATTTCAAGCTATAAAAGAACTTTCTTACAATGGTAT
ATTTACCGGTATATTACTTATGCCTATTTTGCCCTTTATAAATGATAATGGAGAAAATATTGTGAAAATAGTAAAAAAGG
CTCATGAATGTGGTGCAAAATTTATTTTTGCATATGGTATGGGATTAACTTTAAGAGGAAATCAGAGGGAATATTTTTAT
AGGAAACTAATAAGAGAGTTTCCAAAAGAAAATATGGTAGTAAAATATAAAAATGCATTTGGGAATAAATATGAATGTGC
CTCACTTAATCATAAAAAATTATGGAGTATATTTAAAAATGAATGTGAAAAATTAGGTATTTTATATAAAATGGAAGATA
TAATTTTGGCATATAAAGATAATTATGGAAATAATCAGCTAAGCTGGTTTTAG

Upstream 100 bases:

>100_bases
CTAAAAGTAATCTTATAGTACGAGATATTGATATTTTAAAAAAATTAAGACTTATTCACCTACACTAGTAAAAATTACAA
TAACTACCTATGATGATGAA

Downstream 100 bases:

>100_bases
TAATTTAAATAATAAAAAAACTCATTATATAATAATTTACTTTCAATCAAAACTGTGTAATAATATAGAAATGTAAAAAA
CTTAAAAGTTCTTATAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Elongator /MiaB/NifB; DNA Repair Photolyase; Radical SAM Superfamily Protein; Radical SAM-Superfamily Protein; Radical Sam Domain Protein

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MCKKVEPNVCVTSKRFQAIKELSYNGIFTGILLMPILPFINDNGENIVKIVKKAHECGAKFIFAYGMGLTLRGNQREYFY
RKLIREFPKENMVVKYKNAFGNKYECASLNHKKLWSIFKNECEKLGILYKMEDIILAYKDNYGNNQLSWF

Sequences:

>Translated_150_residues
MCKKVEPNVCVTSKRFQAIKELSYNGIFTGILLMPILPFINDNGENIVKIVKKAHECGAKFIFAYGMGLTLRGNQREYFY
RKLIREFPKENMVVKYKNAFGNKYECASLNHKKLWSIFKNECEKLGILYKMEDIILAYKDNYGNNQLSWF
>Mature_150_residues
MCKKVEPNVCVTSKRFQAIKELSYNGIFTGILLMPILPFINDNGENIVKIVKKAHECGAKFIFAYGMGLTLRGNQREYFY
RKLIREFPKENMVVKYKNAFGNKYECASLNHKKLWSIFKNECEKLGILYKMEDIILAYKDNYGNNQLSWF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17572; Mature: 17572

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKKVEPNVCVTSKRFQAIKELSYNGIFTGILLMPILPFINDNGENIVKIVKKAHECGAK
CCCCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH
FIFAYGMGLTLRGNQREYFYRKLIREFPKENMVVKYKNAFGNKYECASLNHKKLWSIFKN
EEEEECCCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCHHHHHHHHHH
ECEKLGILYKMEDIILAYKDNYGNNQLSWF
HHHHHHHHEEHHHEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MCKKVEPNVCVTSKRFQAIKELSYNGIFTGILLMPILPFINDNGENIVKIVKKAHECGAK
CCCCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH
FIFAYGMGLTLRGNQREYFYRKLIREFPKENMVVKYKNAFGNKYECASLNHKKLWSIFKN
EEEEECCCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCHHHHHHHHHH
ECEKLGILYKMEDIILAYKDNYGNNQLSWF
HHHHHHHHEEHHHEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA