| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is yycA [H]
Identifier: 148378301
GI number: 148378301
Start: 351101
End: 353374
Strand: Direct
Name: yycA [H]
Synonym: CBO0299
Alternate gene names: 148378301
Gene position: 351101-353374 (Clockwise)
Preceding gene: 148378300
Following gene: 148378302
Centisome position: 9.03
GC content: 32.37
Gene sequence:
>2274_bases ATGAAAAAGATAAAGTTTACAAAAGAGAATATAGCGTTATCGTTAATTTTGATATTATCCTTAATATTAAATTTAGCGAA TTTGAACATAGAAGGATACGCAAATCAATATTATGCCGCAGGTGTAAAGAGCATGACTTTAAGTTTAAAGAATTTTTTCT TTATATCCTTTGATCCAGCCAGTTTTGTAAGTATTGATAAGCCACCTTTGGGTTTTTGGATACAAGCTATATTTGCTAAA ATATTTGGTTTTAGTGGATGGAGTATAATATTACCTCAGGCTATTGCTGGGGTAGTATCAGTAGGATTAATATATGTTAT TGTTAAAAGAAGCTTTGGAACTGCTGCGGGTCTTATTTCTGCAATATGTCTTGCAGTTACGCCTGTTTTTGTAGCTGTAA GTAGAAATAACACTTGTGATAATTTACTTGTTTTAACATTACTATTAGCTTGCTTAGTTCTTTCTAAGGCAGCAGAAAAA GGGAAACTAAAATATCTTTTAATAAGTTTAGCAATTATAGGGATCGGATTTAACATAAAAATGCTTCAAGCATATATGAT AATACCAGCTATATATATAACTTATCTTCTTTCTAATGCAGTATCCTTCAAAAAAAGAATAGTTCATCTTATGGCTGGTA CAATTATTTTAATTTTAGTTTCATTGTCCTGGGCCTTTATTGTAGACTTAATACCTGAAGGAAATAGACCTTATGTAGGA AGTAGCACTAATAATTCAGTTATGGAGCTTATAATAGGACATAATGGTCTTGAGAGACTTGGTATTGGTAGTAAATCAAC TCAGGGTGGTGGGGCACCAGGAGGAATGGATGGGAAAAATCAGCAAAAAACTGATGGGACCTCCAGTGCAACTAAAAACA AAAATTCAGAGCAAACATCAAAGGAGAATGGGCAAACTGGAGGAGAGACACCATCAATAGACAATGATCAAATGCAAGGA CAACCTCCATCAATGGATAATGGAGAAATGCAAGGGACACCTCCTAATACTCAAGATGGAGGAAAAGGGAATGCTAATCC TCCTAATGGTGATGGAAAAGGTCCCGGTGGAATGCCTCCAGGAGATAATGGAATGCAGAAGCCTAATGGAGGAGGAATGG GAGAAACCTTTGGAGGCCAAGAAGTTGCAAGTATTACTAGATTATTCTCTAATAATAGCTTATCAGACCAAATTATTTGG TTATTTCCTCTTGCTGTGTTTGGATTTATAGCAGCGGCAATAAAAGAAAAGCTAAATAAGACTTCTGATAATAAAAGAAA GTTGTCATTAGTACTGTGGAGTATGTGGTTATTACCTGAATTTATATACTTCAGTTTTATAAAAGGGCTATTCCACCCTT ATTATTTAACTATGCTAGCTCCACCAATTTCAGCTTTAGTAGGAATTGGAGTTGTATCAATGTGGAAGCTATATAATGAG AATGGCTGGAAGTCTTGGATTTTACCAGTAGCACTTATCGCAGACGGATTAACTCAGATATTAATATTATCTTATTATTA TAATATATCAAATACGGCTAAAATTTTAACTACAATAGTAGCAGTTTTATGTATTGTATCTTCCATTATACTAGCTATTG TTAATTTAAGAAAAAATAAAAAAGATATATTAAAGTTTAAAAATATAAAATTTAAGAAATCACTGGTTACTATTGCTTTA ATGGGGCTTTTAATAACTCCTTTAGTTTGCTCTGCTACTACAATTTTTTATCCAGTATCTGGTACTTTCCCATCCGCTGG ATTATCATTAATGACTAATAAGGAAAAAGATGGTTTTAATATGGGTGATCCTAATAGTGGTAATACAAAACTAATAGAAT TTCTAAAGAGTCATAAAACAAATGAAAAATATCTTCTTGTTACTTCATCCACTAATGGGTATGCTTCAGATATAATTATC AATACTGGAGAATCCGTAATGGCACTCGGAGGTTTCTTTGGAACAGATAAAGTAATTACCTTAGATGAATTCAAAAAGTT AGTTAATAATGGAGAAATTAGATATGTAATGGTAGGTGGTATGGGAGGCAACTCAAGTAGTGATATTATGAACTGGGTTA AAGAAAATGGTAAAGTTGTTTCAGAAAGTGAATGGAAAGATTCAAATGAGATAAATAGTGAAGGAGTTAATAAGGATAAC AATAATAAAGAAAACTCAAACTCAAATACTAAACAATTCGGCCAAGAAGGAAAAGGGAATTCTGAACAGTTATATGATTT AAAAAATTATACTGATACTACAACAAAAAAATAG
Upstream 100 bases:
>100_bases AAGATAACATGTAAATAAACATATAAAAAATAAGAAATACTTAATTTTAGAAATGAATAAAGTGAAAACTAACATATATT TTGAGTGGGGGATATAAATA
Downstream 100 bases:
>100_bases TTAATTATATATAGGGAAGCTTAGCATATAATGTTTCAACCCCACCACAGAAATGTGGTGGGGTTTATATATTTAATACT CTATTTTTTAAGTATATAAA
Product: dolichyl-phosphate-mannose-protein mannosyltransferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 757; Mature: 757
Protein sequence:
>757_residues MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSMTLSLKNFFFISFDPASFVSIDKPPLGFWIQAIFAK IFGFSGWSIILPQAIAGVVSVGLIYVIVKRSFGTAAGLISAICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEK GKLKYLLISLAIIGIGFNIKMLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSLSWAFIVDLIPEGNRPYVG SSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQQKTDGTSSATKNKNSEQTSKENGQTGGETPSIDNDQMQG QPPSMDNGEMQGTPPNTQDGGKGNANPPNGDGKGPGGMPPGDNGMQKPNGGGMGETFGGQEVASITRLFSNNSLSDQIIW LFPLAVFGFIAAAIKEKLNKTSDNKRKLSLVLWSMWLLPEFIYFSFIKGLFHPYYLTMLAPPISALVGIGVVSMWKLYNE NGWKSWILPVALIADGLTQILILSYYYNISNTAKILTTIVAVLCIVSSIILAIVNLRKNKKDILKFKNIKFKKSLVTIAL MGLLITPLVCSATTIFYPVSGTFPSAGLSLMTNKEKDGFNMGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYASDIII NTGESVMALGGFFGTDKVITLDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVKENGKVVSESEWKDSNEINSEGVNKDN NNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDTTTKK
Sequences:
>Translated_757_residues MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSMTLSLKNFFFISFDPASFVSIDKPPLGFWIQAIFAK IFGFSGWSIILPQAIAGVVSVGLIYVIVKRSFGTAAGLISAICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEK GKLKYLLISLAIIGIGFNIKMLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSLSWAFIVDLIPEGNRPYVG SSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQQKTDGTSSATKNKNSEQTSKENGQTGGETPSIDNDQMQG QPPSMDNGEMQGTPPNTQDGGKGNANPPNGDGKGPGGMPPGDNGMQKPNGGGMGETFGGQEVASITRLFSNNSLSDQIIW LFPLAVFGFIAAAIKEKLNKTSDNKRKLSLVLWSMWLLPEFIYFSFIKGLFHPYYLTMLAPPISALVGIGVVSMWKLYNE NGWKSWILPVALIADGLTQILILSYYYNISNTAKILTTIVAVLCIVSSIILAIVNLRKNKKDILKFKNIKFKKSLVTIAL MGLLITPLVCSATTIFYPVSGTFPSAGLSLMTNKEKDGFNMGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYASDIII NTGESVMALGGFFGTDKVITLDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVKENGKVVSESEWKDSNEINSEGVNKDN NNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDTTTKK >Mature_757_residues MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSMTLSLKNFFFISFDPASFVSIDKPPLGFWIQAIFAK IFGFSGWSIILPQAIAGVVSVGLIYVIVKRSFGTAAGLISAICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEK GKLKYLLISLAIIGIGFNIKMLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSLSWAFIVDLIPEGNRPYVG SSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQQKTDGTSSATKNKNSEQTSKENGQTGGETPSIDNDQMQG QPPSMDNGEMQGTPPNTQDGGKGNANPPNGDGKGPGGMPPGDNGMQKPNGGGMGETFGGQEVASITRLFSNNSLSDQIIW LFPLAVFGFIAAAIKEKLNKTSDNKRKLSLVLWSMWLLPEFIYFSFIKGLFHPYYLTMLAPPISALVGIGVVSMWKLYNE NGWKSWILPVALIADGLTQILILSYYYNISNTAKILTTIVAVLCIVSSIILAIVNLRKNKKDILKFKNIKFKKSLVTIAL MGLLITPLVCSATTIFYPVSGTFPSAGLSLMTNKEKDGFNMGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYASDIII NTGESVMALGGFFGTDKVITLDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVKENGKVVSESEWKDSNEINSEGVNKDN NNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDTTTKK
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 39 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: NA
Molecular weight: Translated: 81994; Mature: 81994
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSMTLSLKNFFFISFDPA CCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECCEEEEEECCC SFVSIDKPPLGFWIQAIFAKIFGFSGWSIILPQAIAGVVSVGLIYVIVKRSFGTAAGLIS CEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEKGKLKYLLISLAIIGIGFNIK HHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH MLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSLSWAFIVDLIPEGNRPYVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQQKTDGTSSATKNKNSEQTS CCCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH KENGQTGGETPSIDNDQMQGQPPSMDNGEMQGTPPNTQDGGKGNANPPNGDGKGPGGMPP HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GDNGMQKPNGGGMGETFGGQEVASITRLFSNNSLSDQIIWLFPLAVFGFIAAAIKEKLNK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC TSDNKRKLSLVLWSMWLLPEFIYFSFIKGLFHPYYLTMLAPPISALVGIGVVSMWKLYNE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NGWKSWILPVALIADGLTQILILSYYYNISNTAKILTTIVAVLCIVSSIILAIVNLRKNK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH KDILKFKNIKFKKSLVTIALMGLLITPLVCSATTIFYPVSGTFPSAGLSLMTNKEKDGFN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCCCCC MGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYASDIIINTGESVMALGGFFGTDKVIT CCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHCCCCCCCCEEE LDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVKENGKVVSESEWKDSNEINSEGVNKDN HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC NNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDTTTKK CCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSMTLSLKNFFFISFDPA CCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECCEEEEEECCC SFVSIDKPPLGFWIQAIFAKIFGFSGWSIILPQAIAGVVSVGLIYVIVKRSFGTAAGLIS CEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEKGKLKYLLISLAIIGIGFNIK HHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH MLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSLSWAFIVDLIPEGNRPYVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQQKTDGTSSATKNKNSEQTS CCCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH KENGQTGGETPSIDNDQMQGQPPSMDNGEMQGTPPNTQDGGKGNANPPNGDGKGPGGMPP HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GDNGMQKPNGGGMGETFGGQEVASITRLFSNNSLSDQIIWLFPLAVFGFIAAAIKEKLNK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC TSDNKRKLSLVLWSMWLLPEFIYFSFIKGLFHPYYLTMLAPPISALVGIGVVSMWKLYNE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NGWKSWILPVALIADGLTQILILSYYYNISNTAKILTTIVAVLCIVSSIILAIVNLRKNK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH KDILKFKNIKFKKSLVTIALMGLLITPLVCSATTIFYPVSGTFPSAGLSLMTNKEKDGFN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCCCCC MGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYASDIIINTGESVMALGGFFGTDKVIT CCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHCCCCCCCCEEE LDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVKENGKVVSESEWKDSNEINSEGVNKDN HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC NNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDTTTKK CCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]