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The map label for this gene is yraN [C]

Identifier: 148361334

GI number: 148361334

Start: 3560713

End: 3561069

Strand: Reverse

Name: yraN [C]

Synonym: LPC_3309

Alternate gene names: 148361334

Gene position: 3561069-3560713 (Counterclockwise)

Preceding gene: 148361335

Following gene: 148361333

Centisome position: 99.57

GC content: 33.89

Gene sequence:

>357_bases
ATGACCCAAGAAAAAGGAAAGTTTGCTGAACAATTGGCTTTAAATTACTTAAAGGAAAATGGTCTTGCATTAGTAATGCA
AAACTATCATTGCCGTTTAGGAGAAATTGATTTAATTATGCGTGAAGGATCTTATCTGGTTTTTATTGAGGTCCGTTCGC
GTTCAAATATGAATTTTGGTGGGGGGCTTGCCAGCATTACTTACGAAAAGAAACAAAAAATAATAAAAGCAACCTCTCAT
TATATGATTAAGTATCGCATACAAGATAAATTTCCTATACGGTTTGATGTGATTAGTATAGATGGAAAATCAAACAAGAT
TACCTGGTTAAAGAACGCATTTGATGCAGGATGCTAG

Upstream 100 bases:

>100_bases
CGACTCAACAAGTAGCCAGGGTTCTTGAATGGGGGCAATTTAAACAGGGTTTAGCCCATTCACTAGGGGATACTGTTTAG
TTTTGAAGTGAGCAAGAATA

Downstream 100 bases:

>100_bases
GAAGATAATGAATAGAAGGTTTTGAAATGATTCAGTTAGAAGAAAGAGTAAGGCATTTATTTGGTGTCACAATAGAAGCA
AAAATATCAGCAGCCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTQEKGKFAEQLALNYLKENGLALVMQNYHCRLGEIDLIMREGSYLVFIEVRSRSNMNFGGGLASITYEKKQKIIKATSH
YMIKYRIQDKFPIRFDVISIDGKSNKITWLKNAFDAGC

Sequences:

>Translated_118_residues
MTQEKGKFAEQLALNYLKENGLALVMQNYHCRLGEIDLIMREGSYLVFIEVRSRSNMNFGGGLASITYEKKQKIIKATSH
YMIKYRIQDKFPIRFDVISIDGKSNKITWLKNAFDAGC
>Mature_117_residues
TQEKGKFAEQLALNYLKENGLALVMQNYHCRLGEIDLIMREGSYLVFIEVRSRSNMNFGGGLASITYEKKQKIIKATSHY
MIKYRIQDKFPIRFDVISIDGKSNKITWLKNAFDAGC

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=115, Percent_Identity=36.5217391304348, Blast_Score=82, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 13605; Mature: 13474

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEKGKFAEQLALNYLKENGLALVMQNYHCRLGEIDLIMREGSYLVFIEVRSRSNMNFG
CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCC
GGLASITYEKKQKIIKATSHYMIKYRIQDKFPIRFDVISIDGKSNKITWLKNAFDAGC
CCEEEEEHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
TQEKGKFAEQLALNYLKENGLALVMQNYHCRLGEIDLIMREGSYLVFIEVRSRSNMNFG
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCC
GGLASITYEKKQKIIKATSHYMIKYRIQDKFPIRFDVISIDGKSNKITWLKNAFDAGC
CCEEEEEHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA