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The map label for this gene is gmhA [H]

Identifier: 148361333

GI number: 148361333

Start: 3560087

End: 3560686

Strand: Reverse

Name: gmhA [H]

Synonym: LPC_3308

Alternate gene names: 148361333

Gene position: 3560686-3560087 (Counterclockwise)

Preceding gene: 148361334

Following gene: 148361332

Centisome position: 99.56

GC content: 40.5

Gene sequence:

>600_bases
ATGATTCAGTTAGAAGAAAGAGTAAGGCATTTATTTGGTGTCACAATAGAAGCAAAAATATCAGCAGCCGATATGTTGTC
GGGTTCAATAGCTAAAGCGGGGAAGTTGTTGGTTAACTGTTTATTGAATGATGGAAAAATATTCATTTGCGCTAGTGGGG
GATCTAGTGCTAATTGCATGCATTTTTCCAGTTCCATGCTAAATCATTTTGAAGTGGAAAGACCTTCTTTGCCGGTCATT
AATTTATGCGCTGATGCGTCCTGTTTGAGTTCATTTGCCGATGAGCATCACTTTGGTCAAGTGTTTGCAAGGCAAATTCA
AGCCTTGGGCCAAGAGCAAGATGTATTACTTTTACTAACTACATCAGGTAATTCTGATAGCATGCTGCAAGCTCTTCACG
CAGCAAGTGAACGCGGCATGGATACCATTGCACTAAGTGGCCGCGATGGAGGTGTTTTGGCGAATCATATGGGGCCAGAG
GATATAGAGATAAGAGTGGCATCTGACAGTACTGCATTGATAAGAGAGCTACACTTGTTCATATTGCATTGTTTTTGTGA
TTTAATCGAACAATCTTTATTTGGCCAAGTTTTAGGATAA

Upstream 100 bases:

>100_bases
TTGATGTGATTAGTATAGATGGAAAATCAAACAAGATTACCTGGTTAAAGAACGCATTTGATGCAGGATGCTAGGAAGAT
AATGAATAGAAGGTTTTGAA

Downstream 100 bases:

>100_bases
AAAATGAACATGAATCTAAAATTTAAATCCATCATAGTAATGATGATTGGTGCTTTACTGACTGGTTGCGTTGCTGTGGT
TGTTGCAGGTGCTGCAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Sedoheptulose 7-phosphate isomerase [H]

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MIQLEERVRHLFGVTIEAKISAADMLSGSIAKAGKLLVNCLLNDGKIFICASGGSSANCMHFSSSMLNHFEVERPSLPVI
NLCADASCLSSFADEHHFGQVFARQIQALGQEQDVLLLLTTSGNSDSMLQALHAASERGMDTIALSGRDGGVLANHMGPE
DIEIRVASDSTALIRELHLFILHCFCDLIEQSLFGQVLG

Sequences:

>Translated_199_residues
MIQLEERVRHLFGVTIEAKISAADMLSGSIAKAGKLLVNCLLNDGKIFICASGGSSANCMHFSSSMLNHFEVERPSLPVI
NLCADASCLSSFADEHHFGQVFARQIQALGQEQDVLLLLTTSGNSDSMLQALHAASERGMDTIALSGRDGGVLANHMGPE
DIEIRVASDSTALIRELHLFILHCFCDLIEQSLFGQVLG
>Mature_199_residues
MIQLEERVRHLFGVTIEAKISAADMLSGSIAKAGKLLVNCLLNDGKIFICASGGSSANCMHFSSSMLNHFEVERPSLPVI
NLCADASCLSSFADEHHFGQVFARQIQALGQEQDVLLLLTTSGNSDSMLQALHAASERGMDTIALSGRDGGVLANHMGPE
DIEIRVASDSTALIRELHLFILHCFCDLIEQSLFGQVLG

Specific function: Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate [H]

COG id: COG0279

COG function: function code G; Phosphoheptose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789539, Length=191, Percent_Identity=44.5026178010471, Blast_Score=182, Evalue=1e-47,
Organism=Escherichia coli, GI1786416, Length=166, Percent_Identity=37.9518072289157, Blast_Score=120, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020620 [H]

Pfam domain/function: NA

EC number: =5.3.1.28 [H]

Molecular weight: Translated: 21414; Mature: 21414

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLEERVRHLFGVTIEAKISAADMLSGSIAKAGKLLVNCLLNDGKIFICASGGSSANCM
CCCHHHHHHHHHCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCH
HFSSSMLNHFEVERPSLPVINLCADASCLSSFADEHHFGQVFARQIQALGQEQDVLLLLT
HHHHHHHHHHCCCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
TSGNSDSMLQALHAASERGMDTIALSGRDGGVLANHMGPEDIEIRVASDSTALIRELHLF
ECCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCEEEEEECCHHHHHHHHHHH
ILHCFCDLIEQSLFGQVLG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQLEERVRHLFGVTIEAKISAADMLSGSIAKAGKLLVNCLLNDGKIFICASGGSSANCM
CCCHHHHHHHHHCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCH
HFSSSMLNHFEVERPSLPVINLCADASCLSSFADEHHFGQVFARQIQALGQEQDVLLLLT
HHHHHHHHHHCCCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
TSGNSDSMLQALHAASERGMDTIALSGRDGGVLANHMGPEDIEIRVASDSTALIRELHLF
ECCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCEEEEEECCHHHHHHHHHHH
ILHCFCDLIEQSLFGQVLG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA