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The map label for this gene is atpH

Identifier: 148361325

GI number: 148361325

Start: 3555847

End: 3556389

Strand: Reverse

Name: atpH

Synonym: LPC_3300

Alternate gene names: 148361325

Gene position: 3556389-3555847 (Counterclockwise)

Preceding gene: 148361326

Following gene: 148361324

Centisome position: 99.44

GC content: 37.57

Gene sequence:

>543_bases
ATGTCTGATAGTACCACTATAGCCAGACCCTATGCAAAAGCGATATTTGAACATGCTTTAGCAGAAAAAAAACTGAGTGA
ATGGTCAGAATATCTTACATTATTGGCTCAAGTTGTTTTAACTCCTCAAGCTACTCAGTTTATCGCTAATCCTGCATCAA
CAGATGAACAACAAATTGAACTTCTTATTGAGATATGTGGTTCAAAGTTCAAGAAAAATGATGCACTAAATAATTTAATC
AAGCTATTAACAACCAATAAAAGATTGATGTTGTTGCCAGAAATTAAAGCTCTTTATGAAGTATATAGAGCAGAGCAAGA
AAAAATACTGGAGGTTGATGTAGTCAGCTATTCCGAATTGACTCCAGCGCAACAACAGCGTTTGAGCGAATCCTTAAGTC
AAAGATTATCACGTAAGGTTTCTTTAAAAATAAGTATTGATCCCTCCTTGCTTGGCGGAGCGCTAATTCGAGCAGGCGAT
TTAGTTATCGATGGTTCAGTTCGGGGCAAGCTTAATATGCTTGGCACCAGCTTGGCCGCTTAA

Upstream 100 bases:

>100_bases
GCAAAGCTGGCTATTACTGGGGCAGAGAAAATTTTAATGCGAGAGGTAGATGCAAAAGCGAATAGCGAACTGTTAGATAA
CCTAATAGAAGAGATTTAAA

Downstream 100 bases:

>100_bases
TTTAGAGGATAGTTTCCATGTCAGAACAAGTAGCGTTAAATCCTTCTGAAATCAGTGAATTAATCAGAAAGAAAATAGAT
CAATTTAGTGTGGTTTCTGA

Product: F0F1 ATP synthase subunit delta

Products: ATP; H+; H2O [C]

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIELLIEICGSKFKKNDALNNLI
KLLTTNKRLMLLPEIKALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGD
LVIDGSVRGKLNMLGTSLAA

Sequences:

>Translated_180_residues
MSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIELLIEICGSKFKKNDALNNLI
KLLTTNKRLMLLPEIKALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGD
LVIDGSVRGKLNMLGTSLAA
>Mature_179_residues
SDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIELLIEICGSKFKKNDALNNLIK
LLTTNKRLMLLPEIKALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGDL
VIDGSVRGKLNMLGTSLAA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=178, Percent_Identity=39.3258426966292, Blast_Score=129, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_LEGPA (Q5X0P0)

Other databases:

- EMBL:   CR628336
- RefSeq:   YP_125358.1
- ProteinModelPortal:   Q5X0P0
- SMR:   Q5X0P0
- STRING:   Q5X0P0
- GeneID:   3117267
- GenomeReviews:   CR628336_GR
- KEGG:   lpp:lpp3056
- LegioList:   lpp3056
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   FIAICGE
- ProtClustDB:   PRK05758
- BioCyc:   LPNE297246:LPP3056-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14 [C]

Molecular weight: Translated: 19917; Mature: 19786

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHH
LLIEICGSKFKKNDALNNLIKLLTTNKRLMLLPEIKALYEVYRAEQEKILEVDVVSYSEL
HHHHHHCCHHCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHEECCCHHC
TPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGDLVIDGSVRGKLNMLGTSLAA
CHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHH
LLIEICGSKFKKNDALNNLIKLLTTNKRLMLLPEIKALYEVYRAEQEKILEVDVVSYSEL
HHHHHHCCHHCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHEECCCHHC
TPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGDLVIDGSVRGKLNMLGTSLAA
CHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP; H+; Phosphate [C]

Specific reaction: ADP + (4) H+ + Phosphate <==> ATP + (3) H+ + H2O [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA