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The map label for this gene is rimP [H]

Identifier: 148361088

GI number: 148361088

Start: 3303900

End: 3304322

Strand: Reverse

Name: rimP [H]

Synonym: LPC_3059

Alternate gene names: 148361088

Gene position: 3304322-3303900 (Counterclockwise)

Preceding gene: 148361089

Following gene: 148361087

Centisome position: 92.39

GC content: 35.46

Gene sequence:

>423_bases
GTGCTATTAGAGCCTATAATCAAAAATATGGGTTATGAACTTTGGGGCTGTGAATATCTTTCCCAAGGGAAACACTCGTT
ATTAAGAATTTATATAGACAAACCAGATGGAATAGGAATCGATGACTGTCAGGAAGTAAGTAAGCAAGTCAGTGCTATGC
TTGATGTTGAAGACCCTATTCCAGGGCATTATAGTTTGGAAATATCATCTCCTGGGATACCCCGGCCCTTGTTTAGTATC
TGGCAATATCAGCGTTACCTTGGTTATGAAATTCATGTAAAAACTTTTAAGCCAGTCAATGGGAAGCGAAAATTATCAGG
TATTATTGTTTCAGCATCAGAAGATACAATAGTATTGGATATTAATAATGAACATCAAGAAATACTTTTATCAAATATTG
TGAAAGCAAATTTGACAGTCTAG

Upstream 100 bases:

>100_bases
ATGTTGACTAGGATACTGTCTAAATCTAAGTCAGTTACCAGGCTTGGGCGAGTGCGCCCTTTTTTTGTTTATACATACTA
TGATAAATGATGACTTGATA

Downstream 100 bases:

>100_bases
AGAGGCGAACAATGAGCAAAGAATTGTTATTAGTTGCTGAGGCATTATCAAACGAAAGAGGCGTTAGTAAAGACGTCATT
ATACTTGCCATTCAGGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDGIGIDDCQEVSKQVSAMLDVEDPIPGHYSLEISSPGIPRPLFSI
WQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVLDINNEHQEILLSNIVKANLTV

Sequences:

>Translated_140_residues
MLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDGIGIDDCQEVSKQVSAMLDVEDPIPGHYSLEISSPGIPRPLFSI
WQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVLDINNEHQEILLSNIVKANLTV
>Mature_140_residues
MLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDGIGIDDCQEVSKQVSAMLDVEDPIPGHYSLEISSPGIPRPLFSI
WQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVLDINNEHQEILLSNIVKANLTV

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=138, Percent_Identity=45.6521739130435, Blast_Score=126, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 15841; Mature: 15841

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDGIGIDDCQEVSKQVSAMLDVEDPI
CCCHHHHHHCCCCEECHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
PGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVLD
CCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEEEEEECCCCEEEEE
INNEHQEILLSNIVKANLTV
ECCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDGIGIDDCQEVSKQVSAMLDVEDPI
CCCHHHHHHCCCCEECHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
PGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVLD
CCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEEEEEECCCCEEEEE
INNEHQEILLSNIVKANLTV
ECCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA