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The map label for this gene is ybaB [C]

Identifier: 148361068

GI number: 148361068

Start: 3283037

End: 3283375

Strand: Direct

Name: ybaB [C]

Synonym: LPC_3038

Alternate gene names: 148361068

Gene position: 3283037-3283375 (Clockwise)

Preceding gene: 148361067

Following gene: 148361069

Centisome position: 91.8

GC content: 38.35

Gene sequence:

>339_bases
ATGGATATTAATCAAAATTTAGGCAATTTAATGAAAGAAGCGCAAAAAATGCAACAACGTATGCAAGAAGCGCAGCAACA
ATTAAGCCAGTTGGTAGTAAGTGGAGAATCAGGTGGTGGCATGGTTACTATTAAGATGAATGGACGTCATGATGTAACCG
AAGTTAAAATCAAACCCACCTTAATGGATGAAGACATTGAAATGCTGGAAGATTTAATTGCTGCTGCAGTCAATGACGCA
GTGCGCAAAATCGAAAAAGCATCCAAAGAAAAAATCAGCCAACTGACTGCTGGCCTTAATATTCCAACTGATTTAATGGG
TGGTAAAGAAGGAGAGTAA

Upstream 100 bases:

>100_bases
GTTAAAACAAGAATTTTCAGCAGAATTGGTCAAAAATTCTATTGTCCTGTTAAAAGATGACTTATAATACTTAAACTAAC
CATAAATAGACGAGGCTGTA

Downstream 100 bases:

>100_bases
CCCTGGCTATGGATGCTCTAAGCCGCTTGGTAGAGGCGCTTCGCTGTCTTCCCGGTGTGGGACCAAAATCAGCACAAAGG
ATGGTGTTCCATTTATTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MDINQNLGNLMKEAQKMQQRMQEAQQQLSQLVVSGESGGGMVTIKMNGRHDVTEVKIKPTLMDEDIEMLEDLIAAAVNDA
VRKIEKASKEKISQLTAGLNIPTDLMGGKEGE

Sequences:

>Translated_112_residues
MDINQNLGNLMKEAQKMQQRMQEAQQQLSQLVVSGESGGGMVTIKMNGRHDVTEVKIKPTLMDEDIEMLEDLIAAAVNDA
VRKIEKASKEKISQLTAGLNIPTDLMGGKEGE
>Mature_112_residues
MDINQNLGNLMKEAQKMQQRMQEAQQQLSQLVVSGESGGGMVTIKMNGRHDVTEVKIKPTLMDEDIEMLEDLIAAAVNDA
VRKIEKASKEKISQLTAGLNIPTDLMGGKEGE

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=99, Percent_Identity=50.5050505050505, Blast_Score=114, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2672_LEGPL (Q5WT53)

Other databases:

- EMBL:   CR628337
- RefSeq:   YP_128000.1
- HSSP:   P0A8B5
- ProteinModelPortal:   Q5WT53
- SMR:   Q5WT53
- STRING:   Q5WT53
- GeneID:   3114440
- GenomeReviews:   CR628337_GR
- KEGG:   lpf:lpl2672
- LegioList:   lpl2672
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- PhylomeDB:   Q5WT53
- ProtClustDB:   PRK00153
- BioCyc:   LPNE297245:LPL2672-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 12283; Mature: 12283

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINQNLGNLMKEAQKMQQRMQEAQQQLSQLVVSGESGGGMVTIKMNGRHDVTEVKIKPT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCC
LMDEDIEMLEDLIAAAVNDAVRKIEKASKEKISQLTAGLNIPTDLMGGKEGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
>Mature Secondary Structure
MDINQNLGNLMKEAQKMQQRMQEAQQQLSQLVVSGESGGGMVTIKMNGRHDVTEVKIKPT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCC
LMDEDIEMLEDLIAAAVNDAVRKIEKASKEKISQLTAGLNIPTDLMGGKEGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA