Click here to switch to the map view.

The map label for this gene is fabA [C]

Identifier: 148361024

GI number: 148361024

Start: 453671

End: 454567

Strand: Direct

Name: fabA [C]

Synonym: LPC_2984

Alternate gene names: 148361024

Gene position: 453671-454567 (Clockwise)

Preceding gene: 148361025

Following gene: 148361023

Centisome position: 12.68

GC content: 39.13

Gene sequence:

>897_bases
ATGAGGTTCTTATTTGTTGATCGCATTGTACAATTATCCCCAGGAGAATGGATTAAAGGGATAAAGCATGTCACAAGAGA
TGATGCTTATTTAACCACTGATGATCAAGGAAGGCTTTGCTTTATGCCTTCTTTGATTGGTGAAACATTGGGGCAATTGG
CAGCGTGGAATGTGATGCAACATAATCATTTTACTTCAAGGCCAGTCGCTGGCGTAGTATCAAGTGCCCGATTGTATCGA
CCTGCTTACGTCGGTGAAACGATATTGCTTGAATCAAATATTGATTCACTGGATGAAAAAGCAGTTCAATACCATAGCAT
TGCCAAAGTAGGTAATGATATTATTTTTACTATAGATGGAGCATTAGGCCCCATGCTGCCTATGACTGAATTTATTAGTA
CAGAGGTCATTAGACAGCAGTTTGCAGAGATATACAGGCCAGGTGAGTGGTCTTCTGTGTTAGCTTTGAGTTCGCCTGTT
TTAATAGAGGAAAACTGCTCTGATTGTGGAATGATTAATTCTTCCATGCAATTTGACAGAGTTCTCGCCAGTGAACCAGG
TATAAGCTTGATTGCTGAAAAAAGGATAACTCGTTCAGCATCTTATTTCCCAGATCATTTTCCTAACAGACCTGTACTAC
CGATGACGGTACTTCTTGAATGTAAATTGAATTTGGCGAAAGAATTTATAGCTAGAGCAAAATATGATAGAGCTTATCGA
ATCAGCGAATTACGTAAAATTAAAATGAATGAATTTGTTCATCCCGGAGATGTCGTAGTTTGCCAGGTCAAAGTGAAACA
GCAAATGGATGATGAATTAATACTGTCTTATAGGTGTGAGGTTGATGGCAAGCGGGTATGTGTTGTCGACATAGTGCTTA
TCCCAAAAGGTAAATGA

Upstream 100 bases:

>100_bases
TGAAAGTTAACGAAATTCCTGTGTTGTTTACCGTAGAAACTTTTTGCAAGCTGGTTATTTCAGCTATAGCCCAGCAGCAA
GCAACGGAAACTGTAGCCTG

Downstream 100 bases:

>100_bases
GGTTATGAAACGACGAGTTGCTATTACAGGTCTAGGGGTTGTTTCGCCTCTAGGAAATGATGTATCCACCACTTGGAACA
ATTTGATCGCCGGCTATTCT

Product: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase

Products: trans-Delta2-enoyl-acyl-ACP; H2O [C]

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRFLFVDRIVQLSPGEWIKGIKHVTRDDAYLTTDDQGRLCFMPSLIGETLGQLAAWNVMQHNHFTSRPVAGVVSSARLYR
PAYVGETILLESNIDSLDEKAVQYHSIAKVGNDIIFTIDGALGPMLPMTEFISTEVIRQQFAEIYRPGEWSSVLALSSPV
LIEENCSDCGMINSSMQFDRVLASEPGISLIAEKRITRSASYFPDHFPNRPVLPMTVLLECKLNLAKEFIARAKYDRAYR
ISELRKIKMNEFVHPGDVVVCQVKVKQQMDDELILSYRCEVDGKRVCVVDIVLIPKGK

Sequences:

>Translated_298_residues
MRFLFVDRIVQLSPGEWIKGIKHVTRDDAYLTTDDQGRLCFMPSLIGETLGQLAAWNVMQHNHFTSRPVAGVVSSARLYR
PAYVGETILLESNIDSLDEKAVQYHSIAKVGNDIIFTIDGALGPMLPMTEFISTEVIRQQFAEIYRPGEWSSVLALSSPV
LIEENCSDCGMINSSMQFDRVLASEPGISLIAEKRITRSASYFPDHFPNRPVLPMTVLLECKLNLAKEFIARAKYDRAYR
ISELRKIKMNEFVHPGDVVVCQVKVKQQMDDELILSYRCEVDGKRVCVVDIVLIPKGK
>Mature_298_residues
MRFLFVDRIVQLSPGEWIKGIKHVTRDDAYLTTDDQGRLCFMPSLIGETLGQLAAWNVMQHNHFTSRPVAGVVSSARLYR
PAYVGETILLESNIDSLDEKAVQYHSIAKVGNDIIFTIDGALGPMLPMTEFISTEVIRQQFAEIYRPGEWSSVLALSSPV
LIEENCSDCGMINSSMQFDRVLASEPGISLIAEKRITRSASYFPDHFPNRPVLPMTVLLECKLNLAKEFIARAKYDRAYR
ISELRKIKMNEFVHPGDVVVCQVKVKQQMDDELILSYRCEVDGKRVCVVDIVLIPKGK

Specific function: Involved In Saturated Fatty Acids Biosynthesis. [C]

COG id: COG0764

COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.2.1.- [C]

Molecular weight: Translated: 33644; Mature: 33644

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLFVDRIVQLSPGEWIKGIKHVTRDDAYLTTDDQGRLCFMPSLIGETLGQLAAWNVMQ
CEEEEEEHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHH
HNHFTSRPVAGVVSSARLYRPAYVGETILLESNIDSLDEKAVQYHSIAKVGNDIIFTIDG
CCCCCCCCHHHHHHHHHHHCCHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECC
ALGPMLPMTEFISTEVIRQQFAEIYRPGEWSSVLALSSPVLIEENCSDCGMINSSMQFDR
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHH
VLASEPGISLIAEKRITRSASYFPDHFPNRPVLPMTVLLECKLNLAKEFIARAKYDRAYR
HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
ISELRKIKMNEFVHPGDVVVCQVKVKQQMDDELILSYRCEVDGKRVCVVDIVLIPKGK
HHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCC
>Mature Secondary Structure
MRFLFVDRIVQLSPGEWIKGIKHVTRDDAYLTTDDQGRLCFMPSLIGETLGQLAAWNVMQ
CEEEEEEHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHH
HNHFTSRPVAGVVSSARLYRPAYVGETILLESNIDSLDEKAVQYHSIAKVGNDIIFTIDG
CCCCCCCCHHHHHHHHHHHCCHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECC
ALGPMLPMTEFISTEVIRQQFAEIYRPGEWSSVLALSSPVLIEENCSDCGMINSSMQFDR
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHH
VLASEPGISLIAEKRITRSASYFPDHFPNRPVLPMTVLLECKLNLAKEFIARAKYDRAYR
HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
ISELRKIKMNEFVHPGDVVVCQVKVKQQMDDELILSYRCEVDGKRVCVVDIVLIPKGK
HHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-3-hydroxy-acyl-ACP [C]

Specific reaction: D-3-hydroxy-acyl-ACP = trans-Delta2-enoyl-acyl-ACP + H2O [C]

General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA