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The map label for this gene is garP [C]

Identifier: 148360694

GI number: 148360694

Start: 806237

End: 807514

Strand: Direct

Name: garP [C]

Synonym: LPC_2641

Alternate gene names: 148360694

Gene position: 806237-807514 (Clockwise)

Preceding gene: 148360695

Following gene: 148360689

Centisome position: 22.54

GC content: 40.85

Gene sequence:

>1278_bases
ATGCAAAAGCACCTAAATAATATGACTACTAAAAAACAAATTTCATATGGCGTCCTAGTTTGCTTTATCGGGGCTGTTTT
TTACTGTTATGAATTTATTCTCAGAATTGTTCCGGGAGCTTTACAAACAGAGCTAAGTACAGCTTTGGGACATATTTCTG
CTACCACCTTTGGACAAATTTCAGCCCTGTATTATTTTGCATATTCACCCATGCAAATGCCTGTAGGGATGTTAATGGAT
CGCTATGGGCCGAGACGACTTTTGACTTTTGCCTGTTTGTGTTGTGCCTTGGGCTCGTGGATGTTTACTCTGACCTGGTC
AATTGTGCTGGTTGGAATTGGTCGATTCCTGGTGGGATTTGGCTCATCCTTCGCTTTTGTTGGTGTCTTATCTCTGGCTT
TGCATTGGCTGCCACGTCGTTATTTTTCTTTAGTGGCTGGTTTGATTACCACGCTAGGTATGCTAGGACTGGTTTATGGT
GAAATCAAAATAACTGAATGGTCAGAGGTCATAGGCTGGGATCATGTTTTAATGCACATTGCAATGATTGGTTCTGCGCT
GTGTATCTTAACTTTCTTTGTTGTTAGAGATGGTCCAGAAGGATATCAACCCAACAAATATCCTTGGCCCGAGTTTTTCC
ATAACGTGCTTAAGGTACTGACGTCCCATGAAGTGTGGCTTATTGGGTTTGTTGGAGCCTGCCTTTATACTTCATTATCA
GTATTTGGAGAGCTGTGGGGTAAAACCTATTTGGAGCAAGCACATCATTTAACCAAAGTAGAAGCCGCAAAAACTGTTTC
TGCTGTTTTTCTTGGGTGGGCGGTAGGAGCCCCCTTGGCTGGGTACATATCCGATATTACCCGCAGACGATTGTTGCCTT
TGGTGATTGGTGCGATAGTTTCATTAATATGCATTAGTTTTGTTTTGTATTGCCCTGGCCTATCCTATCTTACCTTGAAC
ATATTGCTATTCTTGTATGGTGTTTTCAGTGCAACTGAAATTATAGTTTTTATTATGGCTAAGGAATGTAGTGGTGCCAA
ATTATCAGGAACGGTTTTTGCAGTAACCAATATGATTATTTCTTTGGCGGGTGCTATTTTTCAACCGCTCGTAGGGAAGT
TACTGGATACATTTGGCGACAGCGGTATAGTGGCAGGGGAACATATCTATACGGTTGATGATTATCAAGTGGCTCTTTCG
ATATTACCTATTTCATTACTTTTGGTAACTATTCTGGCTTTCTTTATTAAAGACAAAGACCATTCCAATAACTCTTAA

Upstream 100 bases:

>100_bases
AGTAAACTATATACCGTAGATGATTATCAGTTTGCCTTATCCATTATTCCATTAGGTATATTGATAGCGGCCATTTTAAC
TTTCTTTCTAAAAGAAACTC

Downstream 100 bases:

>100_bases
TCTTGATAAAGACTCTTCTTTGTCTTTGTCAGGATGGACAGTTGAATACTGCGACTAGCTCTTTAACCGGTAGTCGCATC
TGACTTCTGCAGCTTATCCA

Product: major facilitator family transporter transporter

Products: NA

Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Facilitator Superfamily Permease; Permease; Sugar Phosphate Permease; Transmembrane Transporter; Transporter MFS Superfamily; Sugar Transporter; Facilitator Protein; Facilitator Family Transporter Transporter; Transporter Facilitator Family; MFS Family Transporter; Facilitator Superfamily Sugar Transporter; Hexuronate Transporter; Bicyclomycin Resistance Protein; MFS Transporter; Facilitator Membrane Proteins; Facilitator Family Oxalate/Formate Antiporter; Facilitator Family Hexuronate Transporter; Intraphagosomal Amino Acid Transporter Family Protein; Sugar Transport Family Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; Transport Proteins; Nitrate/Nitrite Transporter; Multidrug ABC Transporter; Facilitator Family Protein; NasA Protein; Facilitator Superfamily Transporter Transporter

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MQKHLNNMTTKKQISYGVLVCFIGAVFYCYEFILRIVPGALQTELSTALGHISATTFGQISALYYFAYSPMQMPVGMLMD
RYGPRRLLTFACLCCALGSWMFTLTWSIVLVGIGRFLVGFGSSFAFVGVLSLALHWLPRRYFSLVAGLITTLGMLGLVYG
EIKITEWSEVIGWDHVLMHIAMIGSALCILTFFVVRDGPEGYQPNKYPWPEFFHNVLKVLTSHEVWLIGFVGACLYTSLS
VFGELWGKTYLEQAHHLTKVEAAKTVSAVFLGWAVGAPLAGYISDITRRRLLPLVIGAIVSLICISFVLYCPGLSYLTLN
ILLFLYGVFSATEIIVFIMAKECSGAKLSGTVFAVTNMIISLAGAIFQPLVGKLLDTFGDSGIVAGEHIYTVDDYQVALS
ILPISLLLVTILAFFIKDKDHSNNS

Sequences:

>Translated_425_residues
MQKHLNNMTTKKQISYGVLVCFIGAVFYCYEFILRIVPGALQTELSTALGHISATTFGQISALYYFAYSPMQMPVGMLMD
RYGPRRLLTFACLCCALGSWMFTLTWSIVLVGIGRFLVGFGSSFAFVGVLSLALHWLPRRYFSLVAGLITTLGMLGLVYG
EIKITEWSEVIGWDHVLMHIAMIGSALCILTFFVVRDGPEGYQPNKYPWPEFFHNVLKVLTSHEVWLIGFVGACLYTSLS
VFGELWGKTYLEQAHHLTKVEAAKTVSAVFLGWAVGAPLAGYISDITRRRLLPLVIGAIVSLICISFVLYCPGLSYLTLN
ILLFLYGVFSATEIIVFIMAKECSGAKLSGTVFAVTNMIISLAGAIFQPLVGKLLDTFGDSGIVAGEHIYTVDDYQVALS
ILPISLLLVTILAFFIKDKDHSNNS
>Mature_425_residues
MQKHLNNMTTKKQISYGVLVCFIGAVFYCYEFILRIVPGALQTELSTALGHISATTFGQISALYYFAYSPMQMPVGMLMD
RYGPRRLLTFACLCCALGSWMFTLTWSIVLVGIGRFLVGFGSSFAFVGVLSLALHWLPRRYFSLVAGLITTLGMLGLVYG
EIKITEWSEVIGWDHVLMHIAMIGSALCILTFFVVRDGPEGYQPNKYPWPEFFHNVLKVLTSHEVWLIGFVGACLYTSLS
VFGELWGKTYLEQAHHLTKVEAAKTVSAVFLGWAVGAPLAGYISDITRRRLLPLVIGAIVSLICISFVLYCPGLSYLTLN
ILLFLYGVFSATEIIVFIMAKECSGAKLSGTVFAVTNMIISLAGAIFQPLVGKLLDTFGDSGIVAGEHIYTVDDYQVALS
ILPISLLLVTILAFFIKDKDHSNNS

Specific function: Uptake Of D-Galactarate. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46844; Mature: 46844

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA